Sahli Chaima Abdelhafidh, Ben Salem Ikbel, Jouini Latifa, Laouini Naouel, Dabboubi Rym, Hadj Fredj Sondes, Siala Hajer, Othmeni Rym, Dakhlaoui Boutheina, Fattoum Slaheddine, Bibi Amina, Messaoud Taieb
Laboratory of Clinical Biochemistry and Molecular Biology, Research Laboratory LR00SP03, Children's Hospital, Tunis, Tunisia.
J Clin Lab Anal. 2016 Sep;30(5):392-8. doi: 10.1002/jcla.21867. Epub 2016 Apr 18.
β-Thalassemia is one of the most prevalent worldwide autosomal recessive disorders. It presents a great molecular heterogeneity resulting from more than 200 causative mutations in the β-globin gene. In Tunisia, β-thalassemia represents the most prevalent monogenic hemoglobin disorder with 2.21% of carriers. Efficient and reliable mutation-screening methods are essential in order to establish appropriate prevention programs for at risk couples. The aim of the present study is to develop an efficient method based on the denaturing high-performance liquid chromatography (DHPLC) in which the whole β-globin gene (HBB) is screened for mutations covering about 90% of the spectrum.
We have performed the validation of a DHPLC assay for direct genotyping of 11 known β-thalassemia mutations in the Tunisian population.
DHPLC assay was established based on the analysis of 62 archival β-thalassemia samples previously genotyped then validated with full concordance on 50 tests with blind randomized samples previously genotyped with DNA sequencing and with 96% of consistency on 40 samples as a prospective study.
Compared to other genotyping techniques, the DHPLC method can meet the requirements of direct genotyping of known β-thalassemia mutations in Tunisia and to be applied as a powerful tool for the genetic screening of prenatal and postnatal individuals.
β地中海贫血是全球最常见的常染色体隐性疾病之一。由于β珠蛋白基因存在200多种致病突变,其呈现出极大的分子异质性。在突尼斯,β地中海贫血是最常见的单基因血红蛋白疾病,携带者比例为2.21%。为高危夫妇制定合适的预防方案,高效可靠的突变筛查方法至关重要。本研究旨在开发一种基于变性高效液相色谱法(DHPLC)的有效方法,对整个β珠蛋白基因(HBB)进行突变筛查,覆盖约90%的突变谱。
我们对突尼斯人群中11种已知的β地中海贫血突变进行直接基因分型的DHPLC检测方法进行了验证。
基于对62份先前已进行基因分型的存档β地中海贫血样本的分析建立了DHPLC检测方法,随后在50次对先前经DNA测序进行基因分型的盲法随机样本检测中完全一致地得到验证,并且在前瞻性研究中对40份样本的一致性达到96%。
与其他基因分型技术相比,DHPLC方法能够满足突尼斯已知β地中海贫血突变直接基因分型的要求,可作为产前和产后个体基因筛查的有力工具。