Yuan L, Lai L, Duan F, Chen M, Deng J, Li Z
Jilin Provincial Key Laboratory of Animal Embryo Engineering, Jilin University, Changchun, 130062, China.
Anim Genet. 2016 Aug;47(4):507-9. doi: 10.1111/age.12444. Epub 2016 Apr 19.
Maternally imprinted genes of makorin ring finger protein 3 (MKRN3) and nucleosome assembly protein 1-like 5 (NAP1L5) have been identified in many species but have not yet been investigated in rabbits. In this study, a polymorphism-based approach and bisulfite-sequencing PCR (BSP) were used to determine the imprinting status of MKRN3 and NAP1L5 in rabbits. The single nucleotide polymorphism (SNP)-based sequencing results demonstrated that MKRN3 and NAP1L5 were expressed preferentially from the paternal allele. Furthermore, the BSP results showed the gamete-specific methylation patterns and hemimethylation in brain and full methylation in liver were observed in MKRN3 and NAP1L5 respectively. Thus, we provide the first evidence that MKRN3 and NAP1L5 are paternally expressed genes and that the CpG islands located in the promoter region may be the putative differentially methylated region of these two genes in rabbits.
在许多物种中已鉴定出母源印记基因—— Makorin 环指蛋白 3(MKRN3)和核小体组装蛋白 1 样 5(NAP1L5),但尚未在兔子中进行研究。在本研究中,采用基于多态性的方法和亚硫酸氢盐测序 PCR(BSP)来确定兔子中 MKRN3 和 NAP1L5 的印记状态。基于单核苷酸多态性(SNP)的测序结果表明,MKRN3 和 NAP1L5 优先从父本等位基因表达。此外,BSP 结果显示,在 MKRN3 和 NAP1L5 中分别观察到配子特异性甲基化模式,大脑中的半甲基化以及肝脏中的完全甲基化。因此,我们提供了首个证据,证明 MKRN3 和 NAP1L5 是父源表达基因,并且位于启动子区域的 CpG 岛可能是这两个基因在兔子中的假定差异甲基化区域。