Guo Fangjie, Zhang Jing, Wang Chenchen
College of Environmental and Resource Sciences, Zhejiang University, Yuhangtang Road 866, Hangzhou 310058, China.
Curr Protein Pept Sci. 2017;18(1):4-9. doi: 10.2174/1389203717666160421152132.
Understanding the enantioselectivity is critical for the assessment of environmental behavior and toxicological effect, as well as the ecological risk. As chirality is an important consideration in green chemistry, recent studies demonstrated that enantioselectivity of typical chiral organic pollutants, especially for chiral pesticides, exists in most processes such as aquatic toxicity and degradation. However, to further clarify the metabolism mechanism of enantioselectivity, especially when catalyzed by cytochrome P450 enzymes, development of computational methods is of great importance in this field.
In this article, we reviewed many outstanding achievements around the hot field and prosperous direction for the development of chiral compounds in computational analysis. A promising combination of theoretical methods, named hybrid quantum mechanical- molecular mechanics (QM/MM), will potentially make a significant contribution to metabolism mechanism of enantioselectivity by P450s.
The main body was divided into two parts, we first clarified the enantioselectivity of chiral pollutants and environmental safety with twenty-two studies, and the remaining (twenty-one) were about cytochromes P450-mediated metabolism of typical chiral compounds. Furthermore, we enumerated a series of theoretical method for cytochromes P450-mediated metabolism with sixteen essays. This review illustrates the importance of the enantioselective in environmental safety, and then discussed the enantioselectivity of interactions mechanism with cytochromes P450 metabolic. Finally theoretical calculations became available and enabled various hypotheses to be tested and new solutions to be offered, especially for QM/MM methods.
The review emphasized importance of the enantioselectivity of typical chiral organic pollutants exists in many biological processes (such as toxicity and environmental degradation), and discusses the development of computational methods to clarify the mechanism of enantioselectivie metabolism of chiral pollutants which catalyzed by cytochrome P450 enzymes.
了解对映选择性对于评估环境行为、毒理学效应以及生态风险至关重要。由于手性是绿色化学中的一个重要考量因素,最近的研究表明,典型手性有机污染物的对映选择性,尤其是手性农药的对映选择性,存在于大多数过程中,如水生毒性和降解过程。然而,为了进一步阐明对映选择性的代谢机制,特别是在细胞色素P450酶催化的情况下,计算方法的发展在该领域具有重要意义。
在本文中,我们回顾了计算分析中手性化合物发展的热点领域和繁荣方向的许多杰出成就。一种有前景的理论方法组合,即混合量子力学 - 分子力学(QM/MM),可能会对细胞色素P450介导的对映选择性代谢机制做出重大贡献。
主体部分分为两部分,我们首先通过22项研究阐明了手性污染物的对映选择性和环境安全性,其余21项研究是关于细胞色素P450介导的典型手性化合物的代谢。此外,我们用16篇论文列举了一系列细胞色素P450介导代谢的理论方法。本综述阐述了对映选择性在环境安全中的重要性,然后讨论了与细胞色素P450代谢相互作用机制的对映选择性。最后,理论计算变得可行,并能够检验各种假设并提供新的解决方案,特别是对于QM/MM方法。
该综述强调了典型手性有机污染物的对映选择性存在于许多生物过程(如毒性和环境降解)中的重要性,并讨论了计算方法的发展,以阐明细胞色素P450酶催化的手性污染物对映选择性代谢机制。