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当蛋白质在晶体中完全水合时。

When proteins are completely hydrated in crystals.

作者信息

Carugo Oliviero

机构信息

Department of Chemistry, University of Pavia, Pavia, Italy and Department of Structural and Computational Biology, Vienna University, Vienna, Austria.

出版信息

Int J Biol Macromol. 2016 Aug;89:137-43. doi: 10.1016/j.ijbiomac.2016.04.061. Epub 2016 Apr 22.

Abstract

In the crystalline state, protein surface patches that do not form crystal packing contacts are exposed to the solvent and one or more layers of hydration water molecules can be observed. It is well known that these water molecules cannot be observed at very low resolution, when the scarcity of experimental information precludes the observation of several parts of the protein molecule, like for example side-chains at the protein surface. On the contrary, more details are observable at high resolution. Here it is shown that it is necessary to reach a resolution of about 1.5-1.6Å to observe a continuous hydration layer at the protein surface. This contrasts previous estimations, which were more tolerant and according to which a resolution of 2.5Å was sufficient to describe at the atomic level the structure of the hydration layer. These results should prove useful in guiding a more rigorous selection of structural data to study protein hydration and in interpreting new crystal structures.

摘要

在晶体状态下,不形成晶体堆积接触的蛋白质表面区域会暴露于溶剂中,并且可以观察到一层或多层水化水分子。众所周知,在极低分辨率下无法观察到这些水分子,因为实验信息的匮乏使得蛋白质分子的几个部分(例如蛋白质表面的侧链)无法被观察到。相反,在高分辨率下可以观察到更多细节。此处表明,要观察到蛋白质表面连续的水化层,需要达到约1.5 - 1.6Å的分辨率。这与先前的估计形成对比,先前的估计更为宽松,认为2.5Å的分辨率足以在原子水平描述水化层的结构。这些结果在指导更严格地选择用于研究蛋白质水化的结构数据以及解释新的晶体结构方面应会证明是有用的。

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