Stepanenko Olga V, Roginskii Denis O, Stepanenko Olesya V, Kuznetsova Irina M, Uversky Vladimir N, Turoverov Konstantin K
Laboratory of Structural Dynamics, Stability and Folding of Proteins, Institute of Cytology, Russian Academy of Sciences , St. Petersburg , Russia.
Laboratory of Structural Dynamics, Stability and Folding of Proteins, Institute of Cytology, Russian Academy of Sciences, St. Petersburg, Russia; Department of Molecular Medicine and USF Health Byrd Alzheimer's Research Institute, Morsani College of Medicine, University of South Florida, Tampa, FL, United States.
PeerJ. 2016 Apr 18;4:e1574. doi: 10.7717/peerj.1574. eCollection 2016.
In a family of monomeric odorant-binding proteins (OBPs), bovine OBP (bOBP), that lacks conserved disulfide bond found in other OBPs, occupies unique niche because of its ability to form domain-swapped dimers. In this study, we analyzed conformational stabilities of the recombinant bOBP and its monomeric variants, the bOBP-Gly121+ mutant containing an additional glycine residue after the residue 121 of the bOBP, and the GCC-bOBP mutant obtained from the bOBP-Gly121+ form by introduction of the Trp64Cys/His155Cys double mutation to restore the canonical disulfide bond. We also analyzed the effect of the natural ligand binding on the conformational stabilities of these bOBP variants. Our data are consistent with the conclusion that the unfolding-refolding pathways of the recombinant bOBP and its mutant monomeric forms bOBP-Gly121+ and GCC-bOBP are similar and do not depend on the oligomeric status of the protein. This clearly shows that the information on the unfolding-refolding mechanism is encoded in the structure of the bOBP monomers. However, the process of the bOBP unfolding is significantly complicated by the formation of the domain-swapped dimer, and the rates of the unfolding-refolding reactions essentially depend on the conditions in which the protein is located.
在单体气味结合蛋白(OBP)家族中,牛OBP(bOBP)缺乏其他OBP中发现的保守二硫键,因其能够形成结构域交换二聚体而占据独特的位置。在本研究中,我们分析了重组bOBP及其单体变体的构象稳定性,bOBP-Gly121 +突变体在bOBP的第121位残基后含有一个额外的甘氨酸残基,以及通过引入Trp64Cys/His155Cys双突变从bOBP-Gly121 +形式获得的GCC-bOBP突变体,以恢复典型的二硫键。我们还分析了天然配体结合对这些bOBP变体构象稳定性的影响。我们的数据与以下结论一致:重组bOBP及其突变单体形式bOBP-Gly121 +和GCC-bOBP的去折叠-再折叠途径相似,且不依赖于蛋白质的寡聚状态。这清楚地表明,去折叠-再折叠机制的信息编码在bOBP单体的结构中。然而,bOBP的去折叠过程因结构域交换二聚体的形成而显著复杂化,去折叠-再折叠反应的速率基本上取决于蛋白质所处的条件。