Hydrologic Sciences and Engineering Program, Colorado School of Mines, 1500 Illinois St., Golden, CO 80401, United States.
Hydrologic Sciences and Engineering Program, Colorado School of Mines, 1500 Illinois St., Golden, CO 80401, United States.
Sci Total Environ. 2016 Sep 1;563-564:386-95. doi: 10.1016/j.scitotenv.2016.04.014. Epub 2016 May 1.
A better understanding of how microbial communities interact with their surroundings in physically and chemically heterogeneous subsurface environments will lead to improved quantification of biogeochemical reactions and associated nutrient cycling. This study develops a methodology to predict potential elevated rates of biogeochemical activity (microbial "hotspots") in subsurface environments by correlating microbial DNA and aspects of the community structure with the spatial distribution of geochemical indicators in subsurface sediments. Multiple linear regression models of simulated precipitation leachate, HCl and hydroxylamine extractable iron and manganese, total organic carbon (TOC), and microbial community structure were used to identify sample characteristics indicative of biogeochemical hotspots within fluvially-derived aquifer sediments and overlying soils. The method has been applied to (a) alluvial materials collected at a former uranium mill site near Rifle, Colorado and (b) relatively undisturbed floodplain deposits (soils and sediments) collected along the East River near Crested Butte, Colorado. At Rifle, 16 alluvial samples were taken from 8 sediment cores, and at the East River, 46 soil/sediment samples were collected across and perpendicular to 3 active meanders and an oxbow meander. Regression models using TOC and TOC combined with extractable iron and manganese results were determined to be the best fitting statistical models of microbial DNA (via 16S rRNA gene analysis). Fitting these models to observations in both contaminated and natural floodplain deposits, and their associated alluvial aquifers, demonstrates the broad applicability of the geochemical indicator based approach.
更好地了解微生物群落如何在物理和化学异质的地下环境中与其周围环境相互作用,将有助于提高对生物地球化学反应和相关养分循环的定量理解。本研究通过将微生物 DNA 与群落结构的各个方面与地下沉积物中地球化学指标的空间分布相关联,开发了一种预测地下环境中生物地球化学活性(微生物“热点”)潜在升高速率的方法。模拟沉淀淋出液、HCl 和羟胺可提取铁和锰、总有机碳 (TOC) 和微生物群落结构的多元线性回归模型用于识别指示河流衍生含水层沉积物和覆盖土壤中生物地球化学热点的样本特征。该方法已应用于:(a) 科罗拉多州里弗尔附近一个前铀厂附近采集的冲积材料,以及 (b) 科罗拉多州克里斯特布尔附近东河沿岸采集的相对未受干扰的洪泛区沉积物(土壤和沉积物)。在里弗尔,从 8 个沉积物芯中采集了 16 个冲积样本,在东河,在 3 个活动曲流和一个牛轭湖曲流的交叉点和垂直线上采集了 46 个土壤/沉积物样本。使用 TOC 和 TOC 与可提取铁和锰结果的回归模型被确定为微生物 DNA(通过 16S rRNA 基因分析)的最佳拟合统计模型。将这些模型拟合到污染和自然洪泛区沉积物及其相关的冲积含水层中的观测结果表明,基于地球化学指标的方法具有广泛的适用性。