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用于查询基因和变异注释的高性能网络服务。

High-performance web services for querying gene and variant annotation.

作者信息

Xin Jiwen, Mark Adam, Afrasiabi Cyrus, Tsueng Ginger, Juchler Moritz, Gopal Nikhil, Stupp Gregory S, Putman Timothy E, Ainscough Benjamin J, Griffith Obi L, Torkamani Ali, Whetzel Patricia L, Mungall Christopher J, Mooney Sean D, Su Andrew I, Wu Chunlei

机构信息

Department of Molecular and Experimental Medicine, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA, 92037, USA.

Current address: Avera Cancer Institute, 11099 North Torrey Pines Road, La Jolla, CA, 92037, USA.

出版信息

Genome Biol. 2016 May 6;17(1):91. doi: 10.1186/s13059-016-0953-9.

Abstract

Efficient tools for data management and integration are essential for many aspects of high-throughput biology. In particular, annotations of genes and human genetic variants are commonly used but highly fragmented across many resources. Here, we describe MyGene.info and MyVariant.info, high-performance web services for querying gene and variant annotation information. These web services are currently accessed more than three million times permonth. They also demonstrate a generalizable cloud-based model for organizing and querying biological annotation information. MyGene.info and MyVariant.info are provided as high-performance web services, accessible at http://mygene.info and http://myvariant.info . Both are offered free of charge to the research community.

摘要

高效的数据管理和整合工具对于高通量生物学的许多方面至关重要。特别是,基因和人类遗传变异的注释虽被广泛使用,但在众多资源中高度分散。在此,我们介绍MyGene.info和MyVariant.info,这是用于查询基因和变异注释信息的高性能网络服务。这些网络服务目前每月的访问量超过三百万次。它们还展示了一种可推广的基于云的模型,用于组织和查询生物注释信息。MyGene.info和MyVariant.info作为高性能网络服务提供,可通过http://mygene.info和http://myvariant.info访问。两者均免费提供给研究团体。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0f2a/4858870/ad5dae1d2188/13059_2016_953_Fig1_HTML.jpg

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