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Adv Drug Deliv Rev. 2016 Jun 1;101:34-41. doi: 10.1016/j.addr.2016.04.029. Epub 2016 May 3.
The rule of five (Ro5), based on physicochemical profiles of phase II drugs, is consistent with structural limitations in protein targets and the drug target ligands. Three of four parameters in Ro5 are fundamental to the structure of both target and drug binding sites. The chemical structure of the drug ligand depends on the ligand chemistry and design philosophy. Two extremes of chemical structure and design philosophy exist; ligands constructed in the medicinal chemistry synthesis laboratory without input from natural selection and natural product (NP) metabolites biosynthesized based on evolutionary selection. Exceptions to Ro5 are found mostly among NPs. Chemistry chameleon-like behavior of some NPs due to intra-molecular hydrogen bonding as exemplified by cyclosporine A is a strong contributor to NP Ro5 outliers. The fragment derived, drug Navitoclax is an example of the extensive expertise, resources, time and key decisions required for the rare discovery of a non-NP Ro5 outlier.
基于 II 相药物的物理化学特征的五规则(Ro5)与蛋白质靶标和药物靶标配体的结构限制一致。Ro5 的四个参数中有三个是靶标和药物结合部位结构的基础。药物配体的化学结构取决于配体化学和设计理念。化学结构和设计理念存在两个极端;在药物化学合成实验室中构建的配体,没有经过自然选择的输入,而基于进化选择合成的天然产物(NP)代谢物。Ro5 的例外主要存在于 NPs 中。一些 NPs 由于分子内氢键而表现出化学变色龙样行为,例如环孢菌素 A,这是 NP Ro5 异常值的一个重要贡献因素。片段衍生的药物 Navitoclax 就是一个例子,说明了为了罕见地发现非 NP Ro5 异常值,需要广泛的专业知识、资源、时间和关键决策。