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一种用于量化、可视化和分析腹足纲贝壳形态的方法。

A Method for Quantifying, Visualising, and Analysing Gastropod Shell Form.

作者信息

Liew Thor-Seng, Schilthuizen Menno

机构信息

Institute for Tropical Biology and Conservation, Universiti Malaysia Sabah, Jalan UMS, 88400, Kota Kinabalu, Sabah, Malaysia.

Institute Biology Leiden, Leiden University, P.O. Box 9516, 2300 RA, Leiden, The Netherlands.

出版信息

PLoS One. 2016 Jun 9;11(6):e0157069. doi: 10.1371/journal.pone.0157069. eCollection 2016.

Abstract

Quantitative analysis of organismal form is an important component for almost every branch of biology. Although generally considered an easily-measurable structure, the quantification of gastropod shell form is still a challenge because many shells lack homologous structures and have a spiral form that is difficult to capture with linear measurements. In view of this, we adopt the idea of theoretical modelling of shell form, in which the shell form is the product of aperture ontogeny profiles in terms of aperture growth trajectory that is quantified as curvature and torsion, and of aperture form that is represented by size and shape. We develop a workflow for the analysis of shell forms based on the aperture ontogeny profile, starting from the procedure of data preparation (retopologising the shell model), via data acquisition (calculation of aperture growth trajectory, aperture form and ontogeny axis), and data presentation (qualitative comparison between shell forms) and ending with data analysis (quantitative comparison between shell forms). We evaluate our methods on representative shells of the genera Opisthostoma and Plectostoma, which exhibit great variability in shell form. The outcome suggests that our method is a robust, reproducible, and versatile approach for the analysis of shell form. Finally, we propose several potential applications of our methods in functional morphology, theoretical modelling, taxonomy, and evolutionary biology.

摘要

生物体形态的定量分析几乎是生物学各个分支的重要组成部分。尽管腹足纲贝壳形态通常被认为是一种易于测量的结构,但对其进行量化仍然是一项挑战,因为许多贝壳缺乏同源结构,并且具有螺旋形状,难以通过线性测量来捕捉。鉴于此,我们采用贝壳形态理论建模的理念,其中贝壳形态是根据作为曲率和扭转进行量化的孔口生长轨迹以及由大小和形状表示的孔口形态的孔口个体发育轮廓的产物。我们基于孔口个体发育轮廓开发了一种贝壳形态分析工作流程,从数据准备过程(对贝壳模型进行重新拓扑)开始,经过数据采集(计算孔口生长轨迹、孔口形态和个体发育轴)、数据呈现(贝壳形态之间的定性比较),最后以数据分析(贝壳形态之间的定量比较)结束。我们在后鳃目和扭柱螺属的代表性贝壳上评估了我们的方法,这些贝壳在贝壳形态上表现出很大的变异性。结果表明,我们的方法是一种用于贝壳形态分析的稳健、可重复且通用的方法。最后,我们提出了我们的方法在功能形态学、理论建模、分类学和进化生物学中的几个潜在应用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ee02/4900530/c1babf356384/pone.0157069.g001.jpg

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