Shaker Fariba, Monadjemi S Amirhassan, Naghsh-Nilchi Ahmad Reza
Department of Artificial Intelligence, Faculty of Computer Engineering, University of Isfahan, Isfahan, 81746, Iran.
Department of Artificial Intelligence, Faculty of Computer Engineering, University of Isfahan, Isfahan, 81746, Iran.
Comput Methods Programs Biomed. 2016 Aug;132:11-20. doi: 10.1016/j.cmpb.2016.04.026. Epub 2016 Apr 26.
Manual assessment of sperm morphology is subjective and error prone so developing automatic methods is vital for a more accurate assessment. The first step in automatic evaluation of sperm morphology is sperm head detection and segmentation. In this paper a complete framework for automatic sperm head detection and segmentation is presented.
After an initial thresholding step, the histogram of the Hue channel of HSV color space is used, in addition to size criterion, to discriminate sperm heads in microscopic images. To achieve an improved segmentation of sperm heads, an edge-based active contour method is used. Also a novel tail point detection method is proposed to refine the segmentation by locating and removing the midpiece from the segmented head. An algorithm is also proposed to separate the acrosome and nucleus using morphological operations. Dice coefficient is used to evaluate the segmentation performance. The proposed methods are evaluated using a publicly available dataset.
The proposed method has achieved segmentation accuracy of 0.92 for sperm heads, 0.84 for acrosomes and 0.87 for nuclei, with the standard deviation of 0.05, which significantly outperforms the current state-of-the-art. Also our tail detection method achieved true detection rate of 96%.
In this paper we presented a complete framework for sperm detection and segmentation which is totally automatic. It is shown that using active contours can improve the segmentation results of sperm heads. Our proposed algorithms for tail detection and midpiece removal further improved the segmentation results. The results indicate that our method achieved higher Dice coefficients with less dispersion compared to the existing solutions.
精子形态的人工评估主观且易出错,因此开发自动评估方法对于更准确的评估至关重要。精子形态自动评估的第一步是精子头部检测与分割。本文提出了一个完整的精子头部自动检测与分割框架。
在初始阈值化步骤之后,除了尺寸标准外,还使用HSV颜色空间的色调通道直方图来区分显微图像中的精子头部。为了实现精子头部的改进分割,使用了基于边缘的主动轮廓方法。还提出了一种新颖的尾点检测方法,通过定位并从分割的头部中去除中段来细化分割。还提出了一种使用形态学操作分离顶体和细胞核的算法。使用骰子系数来评估分割性能。所提出的方法使用公开可用的数据集进行评估。
所提出的方法在精子头部的分割准确率达到0.92,顶体为0.84,细胞核为0.87,标准差为0.05,显著优于当前的最先进方法。此外,我们的尾部检测方法的真检测率达到了96%。
在本文中,我们提出了一个完全自动化的精子检测与分割完整框架。结果表明,使用主动轮廓可以改善精子头部的分割结果。我们提出的尾部检测和中段去除算法进一步改善了分割结果。结果表明,与现有解决方案相比,我们的方法获得了更高的骰子系数且离散度更小。