Melchardt Thomas, Hufnagl Clemens, Weinstock David M, Kopp Nadja, Neureiter Daniel, Tränkenschuh Wolfgang, Hackl Hubert, Weiss Lukas, Rinnerthaler Gabriel, Hartmann Tanja N, Greil Richard, Weigert Oliver, Egle Alexander
Third Medical Department at The Paracelsus Medical University Salzburg, Salzburg, Austria.
Salzburg Cancer Research Institute (SCRI), Salzburg, Austria.
Oncotarget. 2016 Aug 9;7(32):51494-51502. doi: 10.18632/oncotarget.9860.
Little information is available about the role of certain mutations for clonal evolution and the clinical outcome during relapse in diffuse large B-cell lymphoma (DLBCL). Therefore, we analyzed formalin-fixed-paraffin-embedded tumor samples from first diagnosis, relapsed or refractory disease from 28 patients using next-generation sequencing of the exons of 104 coding genes. Non-synonymous mutations were present in 74 of the 104 genes tested. Primary tumor samples showed a median of 8 non-synonymous mutations (range: 0-24) with the used gene set. Lower numbers of non-synonymous mutations in the primary tumor were associated with a better median OS compared with higher numbers (28 versus 15 months, p=0.031). We observed three patterns of clonal evolution during relapse of disease: large global change, subclonal selection and no or minimal change possibly suggesting preprogrammed resistance. We conclude that targeted re-sequencing is a feasible and informative approach to characterize the molecular pattern of relapse and it creates novel insights into the role of dynamics of individual genes.
关于某些突变在弥漫性大B细胞淋巴瘤(DLBCL)克隆进化及复发时临床结局中的作用,目前所知甚少。因此,我们使用104个编码基因外显子的二代测序技术,分析了28例患者初次诊断、复发或难治性疾病时的福尔马林固定石蜡包埋肿瘤样本。在检测的104个基因中,74个存在非同义突变。使用该基因集,原发肿瘤样本中非同义突变的中位数为8个(范围:0 - 24个)。与非同义突变数量较多的情况相比,原发肿瘤中非同义突变数量较少与更好的中位总生存期相关(28个月对15个月,p = 0.031)。我们在疾病复发过程中观察到三种克隆进化模式:整体大变化、亚克隆选择以及无变化或极小变化,这可能提示预编程耐药。我们得出结论,靶向重测序是一种可行且信息丰富的方法,可用于描述复发的分子模式,并为单个基因动态变化的作用带来新的见解。