Bilgin Raşit, Ebeoğlu Nadin, İnak Sedat, Kırpık Mehmet Ali, Horns Joshua J, Şekercioğlu Çağan H
Institute of Environmental Sciences, Boğaziçi University, Bebek, 34342, Istanbul, Turkey.
Kafkas University, Faculty of Science, Department of Biology, TR-36100 Kars, Turkey.
PLoS One. 2016 Jun 15;11(6):e0154454. doi: 10.1371/journal.pone.0154454. eCollection 2016.
The combination of habitat loss, climate change, direct persecution, introduced species and other components of the global environmental crisis has resulted in a rapid loss of biodiversity, including species, population and genetic diversity. Birds, which inhabit a wide spectrum of different habitat types, are particularly sensitive to and indicative of environmental changes. The Caucasus endemic bird area, part of which covers northeastern Turkey, is one of the world's key regions harboring a unique bird community threatened with habitat loss. More than 75% of all bird species native to Turkey have been recorded in this region, in particular along the Kars-Iğdır migratory corridor, stopover, wintering and breeding sites along the Aras River, whose wetlands harbor at least 264 bird species. In this study, DNA barcoding technique was used for evaluating the genetic diversity of land bird species of Aras River Bird Paradise at the confluence of Aras River and Iğdır Plains key biodiversity areas. Seventy three COI sequences from 33 common species and 26 different genera were newly generated and used along with 301 sequences that were retrieved from the Barcoding of Life Database (BOLD). Using the sequences obtained in this study, we made global phylogeographic comparisons to define four categories of species, based on barcoding suitability, intraspecific divergence and taxonomy. Our findings indicate that the landbird community of northeastern Turkey has a genetical signature mostly typical of northern Palearctic bird communities while harboring some unique variations. The study also provides a good example of how DNA barcoding can build upon its primary mission of species identification and use available data to integrate genetic variation investigated at the local scale into a global framework. However, the rich bird community of the Aras River wetlands is highly threatened with the imminent construction of the Tuzluca Dam by the government.
栖息地丧失、气候变化、直接迫害、外来物种以及全球环境危机的其他因素共同作用,导致生物多样性迅速丧失,包括物种、种群和遗传多样性。鸟类栖息于广泛多样的不同栖息地类型,对环境变化尤为敏感且具有指示作用。高加索地区特有鸟类区,部分位于土耳其东北部,是世界上拥有独特鸟类群落且面临栖息地丧失威胁的关键地区之一。土耳其本土超过75%的鸟类物种都在该地区被记录到,特别是沿着卡尔斯-伊兹密尔迁徙走廊、阿拉斯河沿岸的中途停留地、越冬地和繁殖地,其湿地至少栖息着264种鸟类。在本研究中,DNA条形码技术被用于评估阿拉斯河鸟类天堂(位于阿拉斯河与伊兹密尔平原关键生物多样性地区交汇处)陆鸟物种的遗传多样性。新生成了来自33个常见物种和26个不同属的73条细胞色素氧化酶亚基I(COI)序列,并与从生命条形码数据库(BOLD)检索到的301条序列一起使用。利用本研究获得的序列,我们基于条形码适用性、种内分歧和分类学进行了全球系统发育地理学比较,以定义四类物种。我们的研究结果表明,土耳其东北部的陆鸟群落具有大多典型的古北界北部鸟类群落的遗传特征,同时也存在一些独特变异。该研究还提供了一个很好的例子,展示了DNA条形码如何在其物种鉴定的主要任务基础上,利用现有数据将在地方尺度上研究的遗传变异整合到全球框架中。然而,阿拉斯河湿地丰富的鸟类群落因政府即将修建图兹卢卡大坝而受到严重威胁。