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对15名突尼斯患者的GALNS研究队列进行的分子分析:一种新突变的描述。

Molecular analysis in a GALNS study cohort of 15 Tunisian patients: description of a novel mutation.

作者信息

Chkioua Latifa, Khedhiri Souhir, Hafsi Hind, Grissa Oussama, Ben Turkia Hadhami, Miled Abdelhedi, Laradi Sandrine, Froissart Roseline, Alif Najat

机构信息

Laboratory of Biochemistry, F. Hached Hospital, 4000, Sousse, Tunisia.

University of Monastir, 5000, Monastir, Tunisia.

出版信息

Diagn Pathol. 2016 Jun 17;11(1):51. doi: 10.1186/s13000-016-0498-y.

DOI:10.1186/s13000-016-0498-y
PMID:27317439
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4912732/
Abstract

BACKGROUND

Mucopolysaccharidosis type IVA (MPS IVA) is an autosomal recessive disease caused by the deficiency of the lysosomal enzyme N-acetylgalactosamine-6-sulfate sulfatase (GALNS). The purpose of this study was to analyze the GALNS mutations and the haplotypes associated.

METHODS

Mutation screening of the GALNS gene was performed by direct sequence analysis using DNA samples from 15 unrelated Tunisian MPS IVA patients. We also analyzed the haplotypes associated with the novel mutation and with the other reported GALNS mutations.

RESULTS

We have identified an unreported missense mutation p.D288G (c.863A > G) in one patient, the most frequently c.120 + 1G > A (IVS1 + 1G > A) mutation in eleven MPS IVA patients and three previously reported mutations p.G66R, p.A85T and p.R386C on the other MPS IVA patients. All the studied patients were homozygous for these identified mutations. Bioinformatics analysis predicted the novel mutation as being probably pathogenic. These findings with the unobserved p.D288G mutation in controls subjects, suggested that it is a disease-causing mutation, which was correlated with the severe phenotype observed in the patients. We have found that the two GALNS unreported and reported mutations, respectively p.D288G and p.R386C, were associated with a common and specific haplotype.

CONCLUSION

Our results were in agreement with previous reports from Tunisia, suggesting, on one hand the genotype/phenotype correlations in MPS IVA patients and the other hand the haplotype analyses were useful for determination of mutation origin in Tunisian population.

摘要

背景

IVA型黏多糖贮积症(MPS IVA)是一种常染色体隐性疾病,由溶酶体酶N-乙酰半乳糖胺-6-硫酸酯酶(GALNS)缺乏所致。本研究旨在分析GALNS基因突变及相关单倍型。

方法

采用直接测序分析法,对15例来自突尼斯的无亲缘关系的MPS IVA患者的DNA样本进行GALNS基因突变筛查。我们还分析了与新突变及其他已报道的GALNS突变相关的单倍型。

结果

我们在1例患者中鉴定出一个未报道的错义突变p.D288G(c.863A>G),在11例MPS IVA患者中最常见的是c.120+1G>A(IVS1+1G>A)突变,在其他MPS IVA患者中发现3个先前报道的突变p.G66R、p.A85T和p.R386C。所有研究患者这些鉴定出的突变均为纯合子。生物信息学分析预测该新突变可能具有致病性。这些发现以及在对照受试者中未观察到p.D288G突变,表明它是一个致病突变,这与在患者中观察到的严重表型相关。我们发现两个未报道和已报道的GALNS突变,分别为p.D288G和p.R386C,与一个共同且特定的单倍型相关。

结论

我们的结果与突尼斯先前的报道一致,一方面表明MPS IVA患者存在基因型/表型相关性,另一方面表明单倍型分析有助于确定突尼斯人群中突变的起源。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5df1/4912732/4619559253fc/13000_2016_498_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5df1/4912732/a7a910f82f6d/13000_2016_498_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5df1/4912732/4619559253fc/13000_2016_498_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5df1/4912732/a7a910f82f6d/13000_2016_498_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5df1/4912732/4619559253fc/13000_2016_498_Fig2_HTML.jpg

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Mucopolysaccharidosis IVA within Tunisian patients: Confirmation of the two novel GALNS gene mutations.
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