Département de Biochimie, Faculté de Médecine et des Sciences de la Santé, Université de Sherbrooke, Sherbrooke, Qc., Canada.
Institut de Pharmacologie de Sherbrooke, Université de Sherbrooke, Sherbrooke, Canada.
Sci Rep. 2016 Jun 24;6:28486. doi: 10.1038/srep28486.
START domain proteins are conserved α/β helix-grip fold that play a role in the non-vesicular and intracellular transport of lipids and sterols. The mechanism and conformational changes permitting the entry of the ligand into their buried binding sites is not well understood. Moreover, their functions and the identification of cognate ligands is still an active area of research. Here, we report the solution structure of STARD6 and the characterization of its backbone dynamics on multiple time-scales through (15)N spin-relaxation and amide exchange studies. We reveal for the first time the presence of concerted fluctuations in the Ω1 loop and the C-terminal helix on the microsecond-millisecond time-scale that allows for the opening of the binding site and ligand entry. We also report that STARD6 binds specifically testosterone. Our work represents a milestone for the study of ligand binding mechanism by other START domains and the elucidation of the biological function of STARD6.
START 域蛋白是保守的 α/β 螺旋夹折叠结构,在脂质和甾醇的非囊泡和细胞内运输中发挥作用。允许配体进入其埋藏结合位点的机制和构象变化尚不清楚。此外,它们的功能和同源配体的鉴定仍然是一个活跃的研究领域。在这里,我们报告了 STARD6 的溶液结构,并通过 (15)N 自旋弛豫和酰胺交换研究,对其在多个时间尺度上的骨架动力学进行了表征。我们首次揭示了在微秒-毫秒时间尺度上 Ω1 环和 C 末端螺旋的协同波动的存在,这允许结合位点和配体进入的打开。我们还报告说,STARD6 特异性结合睾酮。我们的工作代表了研究其他 START 域的配体结合机制和阐明 STARD6 的生物学功能的一个里程碑。