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遗传性血小板疾病:利用新一代测序技术从血小板基因组学中获得的见解。

Inherited platelet disorders: Insight from platelet genomics using next-generation sequencing.

作者信息

Maclachlan Annabel, Watson Steve P, Morgan Neil V

机构信息

a Institute of Cardiovascular Sciences, College of Medical and Dental Sciences , University of Birmingham , Birmingham , B15 2TT , UK.

出版信息

Platelets. 2017 Jan;28(1):14-19. doi: 10.1080/09537104.2016.1195492. Epub 2016 Jun 27.

Abstract

Inherited platelet disorders (IPDs) are a heterogeneous group of disorders associated with normal or reduced platelet counts and bleeding diatheses of varying severities. The identification of the underlying cause of IPDs is clinically challenging due to the absence of a gold-standard platelet test, and is often based on a clinical presentation and normal values in other hematology assays. As a consequence, a DNA-based approach has a potentially important role in the investigation of these patients. Next-generation sequencing (NGS) technologies are allowing the rapid analysis of genes that have been previously implicated in IPDs or that are known to have a key role in platelet regulation, as well as novel genes that have not been previously implicated in platelet dysfunction. The potential limitations of NGS arise with the interpretation of the sheer volume of genetic information obtained from whole exome sequencing (WES) or whole genome sequencing (WGS) in order to identify function-disrupting variants. Following on from bioinformatic analysis, a number of candidate genetic variants usually remain, therefore adding to the difficulty of phenotype-genotype segregation verification. Linking genetic changes to an underlying bleeding disorder is an ongoing challenge and may not always be feasible due to the multifactorial nature of IPDs. Nevertheless, NGS will play a key role in our understanding of the mechanisms of platelet function and the genetics involved.

摘要

遗传性血小板疾病(IPDs)是一组异质性疾病,与血小板计数正常或减少以及不同严重程度的出血素质有关。由于缺乏金标准的血小板检测方法,IPDs潜在病因的鉴定在临床上具有挑战性,通常基于临床表现和其他血液学检测的正常数值。因此,基于DNA的方法在这些患者的调查中具有潜在的重要作用。新一代测序(NGS)技术能够快速分析先前与IPDs相关或已知在血小板调节中起关键作用的基因,以及先前未涉及血小板功能障碍的新基因。NGS的潜在局限性在于对从全外显子测序(WES)或全基因组测序(WGS)获得的大量遗传信息进行解读,以识别功能破坏变异。在生物信息学分析之后,通常会留下许多候选遗传变异,因此增加了表型-基因型分离验证的难度。将基因变化与潜在的出血性疾病联系起来是一项持续的挑战,由于IPDs的多因素性质,这可能并不总是可行的。尽管如此,NGS将在我们对血小板功能机制和相关遗传学的理解中发挥关键作用。

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本文引用的文献

1
A high-throughput sequencing test for diagnosing inherited bleeding, thrombotic, and platelet disorders.
Blood. 2016 Jun 9;127(23):2791-803. doi: 10.1182/blood-2015-12-688267. Epub 2016 Apr 15.
3
SLFN14-related thrombocytopenia: identification within a large series of patients with inherited thrombocytopenia.
Thromb Haemost. 2016 May 2;115(5):1076-9. doi: 10.1160/TH15-11-0884. Epub 2016 Jan 14.
4
SLFN14 mutations underlie thrombocytopenia with excessive bleeding and platelet secretion defects.
J Clin Invest. 2015 Sep;125(9):3600-5. doi: 10.1172/JCI80347. Epub 2015 Aug 17.
6
Deleterious mutation in the FYB gene is associated with congenital autosomal recessive small-platelet thrombocytopenia.
J Thromb Haemost. 2015 Jul;13(7):1285-92. doi: 10.1111/jth.12966. Epub 2015 May 25.
7
αIIbβ3 variants defined by next-generation sequencing: predicting variants likely to cause Glanzmann thrombasthenia.
Proc Natl Acad Sci U S A. 2015 Apr 14;112(15):E1898-907. doi: 10.1073/pnas.1422238112. Epub 2015 Mar 31.
9
Germline ETV6 mutations in familial thrombocytopenia and hematologic malignancy.
Nat Genet. 2015 Feb;47(2):180-5. doi: 10.1038/ng.3177. Epub 2015 Jan 12.

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