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光学阱中一束柔性肌动蛋白丝的性质

On the properties of a bundle of flexible actin filaments in an optical trap.

作者信息

Perilli Alessia, Pierleoni Carlo, Ciccotti Giovanni, Ryckaert Jean-Paul

机构信息

Department of Physics, Sapienza University of Rome, P.le Aldo Moro 2, I-00185 Rome, Italy.

Department of Physical and Chemical Sciences, University of L'Aquila, Via Vetoio 10, 67100 L'Aquila, Italy.

出版信息

J Chem Phys. 2016 Jun 28;144(24):245102. doi: 10.1063/1.4954186.

Abstract

We establish the statistical mechanics framework for a bundle of Nf living and uncrosslinked actin filaments in a supercritical solution of free monomers pressing against a mobile wall. The filaments are anchored normally to a fixed planar surface at one of their ends and, because of their limited flexibility, they grow almost parallel to each other. Their growing ends hit a moving obstacle, depicted as a second planar wall, parallel to the previous one and subjected to a harmonic compressive force. The force constant is denoted as the trap strength while the distance between the two walls as the trap length to make contact with the experimental optical trap apparatus. For an ideal solution of reactive filaments and free monomers at fixed free monomer chemical potential μ1, we obtain the general expression for the grand potential from which we derive averages and distributions of relevant physical quantities, namely, the obstacle position, the bundle polymerization force, and the number of filaments in direct contact with the wall. The grafted living filaments are modeled as discrete Wormlike chains, with F-actin persistence length ℓp, subject to discrete contour length variations ±d (the monomer size) to model single monomer (de)polymerization steps. Rigid filaments (ℓp = ∞), either isolated or in bundles, all provide average values of the stalling force in agreement with Hill's predictions Fs (H)=NfkBTln(ρ1/ρ1c)/d, independent of the average trap length. Here ρ1 is the density of free monomers in the solution and ρ1c its critical value at which the filament does not grow nor shrink in the absence of external forces. Flexible filaments (ℓp < ∞) instead, for values of the trap strength suitable to prevent their lateral escape, provide an average bundle force and an average trap length slightly larger than the corresponding rigid cases (few percents). Still the stalling force remains nearly independent on the average trap length, but results from the product of two strongly L-dependent contributions: the fraction of touching filaments ∝〈L〉(O.T.) (2) and the single filament buckling force ∝〈L〉(O.T.) (-2).

摘要

我们建立了一个统计力学框架,用于描述在自由单体的超临界溶液中,一束Nf条活的且未交联的肌动蛋白丝挤压在可移动壁上的情况。这些丝在其一端正常地锚定在固定的平面表面上,并且由于它们有限的柔韧性,它们几乎彼此平行生长。它们的生长端撞击一个移动的障碍物,该障碍物被描绘为第二个平面壁,与前一个壁平行并受到谐波压缩力。力常数表示为阱强度,而两壁之间的距离表示为阱长度,以便与实验光学阱装置相联系。对于在固定的自由单体化学势μ1下的反应性丝和自由单体的理想溶液,我们得到了巨势的一般表达式,从中我们推导出相关物理量的平均值和分布,即障碍物位置、束状聚合力以及与壁直接接触的丝的数量。接枝的活丝被建模为离散的蠕虫状链,具有F - 肌动蛋白持久长度ℓp,受到离散的轮廓长度变化±d(单体大小)以模拟单单体(去)聚合步骤。刚性丝(ℓp = ∞),无论是孤立的还是成束的,都提供了与希尔预测Fs (H)=NfkBTln(ρ1/ρ1c)/d一致的停滞力平均值,与平均阱长度无关。这里ρ1是溶液中自由单体的密度,ρ1c是其临界值,在没有外力的情况下,丝在此值下既不生长也不收缩。相反,对于适合防止其横向逃逸的阱强度值,柔性丝(ℓp < ∞)提供的平均束力和平均阱长度比相应的刚性情况略大(几个百分点)。尽管如此,停滞力仍然几乎与平均阱长度无关,但它是由两个强烈依赖于L的贡献的乘积得出的:接触丝的分数∝〈L〉(O.T.) (2)和单丝屈曲力∝〈L〉(O.T.) (-2)。

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