Caballero Lorena, Hodge Bob, Hernandez Sergio
Centro de Ciencias de la Complejidad C3, Universidad Nacional Autónoma de México Mexico City, Mexico.
Institute for Culture and Society, Western Sydney University Parramatta, NSW, Australia.
Front Cell Infect Microbiol. 2016 Jun 14;6:57. doi: 10.3389/fcimb.2016.00057. eCollection 2016.
Cellular automatons and computer simulation games are widely used as heuristic devices in biology, to explore implications and consequences of specific theories. Conway's Game of Life has been widely used for this purpose. This game was designed to explore the evolution of ecological communities. We apply it to other biological processes, including symbiopoiesis. We show that Conway's organization of rules reflects the epigenetic principle, that genetic action and developmental processes are inseparable dimensions of a single biological system, analogous to the integration processes in symbiopoiesis. We look for similarities and differences between two epigenetic models, by Turing and Edelman, as they are realized in Game of Life objects. We show the value of computer simulations to experiment with and propose generalizations of broader scope with novel testable predictions. We use the game to explore issues in symbiopoiesis and evo-devo, where we explore a fractal hypothesis: that self-similarity exists at different levels (cells, organisms, ecological communities) as a result of homologous interactions of two as processes modeled in the Game of Life.
细胞自动机和计算机模拟游戏在生物学中被广泛用作启发式工具,以探索特定理论的含义和结果。康威的《生命游戏》已被广泛用于此目的。该游戏旨在探索生态群落的演化。我们将其应用于包括共生起源在内的其他生物过程。我们表明,康威的规则组织反映了表观遗传原理,即遗传作用和发育过程是单一生物系统中不可分割的维度,类似于共生起源中的整合过程。我们通过图灵和埃德尔曼提出的两个表观遗传模型在《生命游戏》对象中的实现,来寻找它们之间的异同。我们展示了计算机模拟在进行实验以及提出具有更广泛范围和新颖可测试预测的概括方面的价值。我们使用该游戏来探索共生起源和演化发育生物学中的问题,在此过程中我们探索一个分形假设:由于《生命游戏》中建模的两个过程的同源相互作用,在不同层次(细胞、生物体、生态群落)存在自相似性。