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鳞翅目核基因组中30个新基因区域的PCR引物。

PCR primers for 30 novel gene regions in the nuclear genomes of Lepidoptera.

作者信息

Wahlberg Niklas, Peña Carlos, Ahola Milla, Wheat Christopher W, Rota Jadranka

机构信息

Department of Biology, University of Turku, 20014 Turku, Finland; Department of Biology, Lund University, 223 62 Lund, Sweden.

Department of Biology, University of Turku, 20014 Turku, Finland.

出版信息

Zookeys. 2016 Jun 8(596):129-41. doi: 10.3897/zookeys.596.8399. eCollection 2016.

DOI:10.3897/zookeys.596.8399
PMID:27408580
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4926658/
Abstract

We report primer pairs for 30 new gene regions in the nuclear genomes of Lepidoptera that can be amplified using a standard PCR protocol. The new primers were tested across diverse Lepidoptera, including nonditrysians and a wide selection of ditrysians. These new gene regions give a total of 11,043 bp of DNA sequence data and they show similar variability to traditionally used nuclear gene regions in studies of Lepidoptera. We feel that a PCR-based approach still has its place in molecular systematic studies of Lepidoptera, particularly at the intrafamilial level, and our new set of primers now provides a route to generating phylogenomic datasets using traditional methods.

摘要

我们报告了鳞翅目核基因组中30个新基因区域的引物对,这些引物对可使用标准PCR方案进行扩增。新引物在多种鳞翅目昆虫中进行了测试,包括非双孔类和多种双孔类。这些新基因区域总共提供了11043 bp的DNA序列数据,并且在鳞翅目研究中,它们显示出与传统使用的核基因区域相似的变异性。我们认为基于PCR的方法在鳞翅目的分子系统研究中仍然具有一席之地,特别是在科内水平上,并且我们的新引物集现在为使用传统方法生成系统基因组数据集提供了一条途径。