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Genome Announc. 2016 Jul 14;4(4):e00668-16. doi: 10.1128/genomeA.00668-16.
2
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RASTtk: a modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes.RASTtk：一种用于构建定制注释管道和批量注释基因组的RAST算法的模块化可扩展实现。
Sci Rep. 2015 Feb 10;5:8365. doi: 10.1038/srep08365.
2
Haloalkylphosphorus hydrolases purified from Sphingomonas sp. strain TDK1 and Sphingobium sp. strain TCM1.从鞘氨醇单胞菌属菌株TDK1和鞘氨醇杆菌属菌株TCM1中纯化得到的卤代烷基磷酸水解酶。
Appl Environ Microbiol. 2014 Sep;80(18):5866-73. doi: 10.1128/AEM.01845-14. Epub 2014 Jul 18.
3
Isolation and identification of persistent chlorinated organophosphorus flame retardant-degrading bacteria.持久性含氯有机磷阻燃剂降解菌的分离与鉴定。
Appl Environ Microbiol. 2010 Aug;76(15):5292-6. doi: 10.1128/AEM.00506-10. Epub 2010 Jun 4.
4
Enrichment and characterization of chlorinated organophosphate ester-degrading mixed bacterial cultures.氯化有机磷酸酯降解混合细菌培养物的富集与表征
J Biosci Bioeng. 2008 Jul;106(1):27-32. doi: 10.1263/jbb.106.27.
5
RNAmmer: consistent and rapid annotation of ribosomal RNA genes.RNAmmer：核糖体RNA基因的一致性快速注释
Nucleic Acids Res. 2007;35(9):3100-8. doi: 10.1093/nar/gkm160. Epub 2007 Apr 22.
6
tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.tRNAscan-SE：用于改进基因组序列中转运RNA基因检测的程序。
Nucleic Acids Res. 1997 Mar 1;25(5):955-64. doi: 10.1093/nar/25.5.955.

鞘氨醇单胞菌属菌株TCM1和鞘脂单胞菌属菌株TDK1的基因组序列草图，这两种细菌可降解卤代烷基磷酸酯阻燃剂和增塑剂

Draft Genome Sequences of Sphingobium sp. Strain TCM1 and Sphingomonas sp. Strain TDK1, Haloalkyl Phosphate Flame Retardant- and Plasticizer-Degrading Bacteria.

作者信息

Kera Yoshio, Abe Katsumasa, Kasai Daisuke, Fukuda Masao, Takahashi Shouji

机构信息

Department of Bioengineering, Nagaoka University of Technology, Nagaoka, Niigata, Japan

Department of Bioengineering, Nagaoka University of Technology, Nagaoka, Niigata, Japan.

出版信息

Genome Announc. 2016 Jul 14;4(4):e00668-16. doi: 10.1128/genomeA.00668-16.

DOI:10.1128/genomeA.00668-16
PMID:27417843
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4945803/
Abstract

Sphingobium sp. strain TCM1 and Sphingomonas sp. strain TDK1 are haloalkyl phosphate flame retardant- and plasticizer-degrading bacteria. We report here the draft genome sequences of these strains to provide insights into the molecular mechanism underlying their degradation ability.

摘要

鞘氨醇单胞菌属菌株TCM1和鞘脂单胞菌属菌株TDK1是卤代烷基磷酸酯阻燃剂和增塑剂降解菌。我们在此报告这些菌株的基因组草图序列，以深入了解其降解能力背后的分子机制。