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含时密度泛函理论计算以及质子化程度不同时质子溶剂中钙镁试剂构象的热效应

TD-DFT calculations and thermal effects on conformers of calmagite in protic solvents varying the degree of protonation.

作者信息

Cisneros-García Z N, Mara Non-Ruiz V F, Rodríguez-Zavala J G

机构信息

Departamento de Ciencias Exactas y Tecnología, Centro Universitario de los Lagos, Universidad de Guadalajara, Enrique Díaz de León, 1144, Lagos de Moreno, Jalisco, México.

Departamento de Ciencias de la Tierra y la Vida, Centro Universitario de los Lagos, Universidad de Guadalajara, Enrique Díaz de León, 1144, Lagos de Moreno, Jalisco, México.

出版信息

J Mol Model. 2016 Aug;22(8):191. doi: 10.1007/s00894-016-3054-5. Epub 2016 Jul 26.

Abstract

The main absorption peaks were obtained for 1-(1-hydroxy-4-methyl-2-phenylazo)-2-naphthol-4-sulfonic acid. Generalized gradient approximation, hybrid, semi-empirical, and Coulomb attenuating methods were utilized to compare theoretical electronic transitions and experimental absorption spectra at different pH. The main peaks and shoulders observed in experimental spectra were assigned to its correct conformer. In order to find the most populated conformer, thermal effects on stability calculations were investigated to obtain molar fractions of possible isomers present at room and higher temperature. Theoretical electronic transitions at distinct pH could be obtained varying the protonation a deprotonation degree. It was found that generalized gradient approximation performs very well the first transition peak at neutral pH. For higher pH, all methodologies got a bathochromic shift in agreement with experiment and finally, from these theoretical results, it was obtained that this azo dye is hardly protonated in experiments since results presented here, predict a variation of absorption spectra for all proposed methodologies when the molecule is protonated, which is different to experimental results. Graphical Abstract Calculated electronic transitions of azo and hydrazone tautomers in water implicit solvent (BLYP/6-311G(2d,p) methodology).

摘要

获得了1-(1-羟基-4-甲基-2-苯基偶氮)-2-萘酚-4-磺酸的主要吸收峰。利用广义梯度近似、杂化、半经验和库仑衰减方法比较了不同pH值下的理论电子跃迁和实验吸收光谱。实验光谱中观察到的主要峰和肩峰被指定为其正确的构象异构体。为了找到最丰富的构象异构体,研究了热效应在稳定性计算中的作用,以获得室温及更高温度下可能存在的异构体的摩尔分数。通过改变质子化和去质子化程度,可以获得不同pH值下的理论电子跃迁。研究发现,广义梯度近似在中性pH值下能很好地表现出第一个跃迁峰。对于更高的pH值,所有方法都出现了与实验一致的红移,最后,从这些理论结果可以得出,这种偶氮染料在实验中很难被质子化,因为这里给出的结果预测,当分子被质子化时,所有提出的方法的吸收光谱都会发生变化,这与实验结果不同。图形摘要:在水隐式溶剂中计算的偶氮和腙互变异构体的电子跃迁(BLYP/6-311G(2d,p)方法)

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