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基于基因芯片微阵列分析聚(γ-谷氨酸)对拟南芥代谢途径的影响

Analysis of the Metabolic Pathways Affected by Poly(γ-glutamic Acid) in Arabidopsis thaliana Based on GeneChip Microarray.

作者信息

Xu Zongqi, Lei Peng, Feng Xiaohai, Li Sha, Xu Hong

机构信息

State Key Laboratory of Materials-Oriented Chemical Engineering and Jiangsu National Synergetic Innovation Center for Advanced Materials, Nanjing Tech University , Nanjing 211816, People's Republic of China.

出版信息

J Agric Food Chem. 2016 Aug 17;64(32):6257-66. doi: 10.1021/acs.jafc.6b02163. Epub 2016 Aug 3.

Abstract

Plant growth is promoted by poly(γ-glutamic acid) (γ-PGA). However, the molecular mechanism underlying such promotion is not yet well understood. Therefore, we used GeneChip microarrays to explore the effects of γ-PGA on gene transcription in Arabidopsis thaliana. Our results revealed 299 genes significantly regulated by γ-PGA. These differently expressed genes participate mainly in metabolic and cellular processes and in stimuli responses. The metabolic pathways linked to these differently expressed genes were also investigated. A total of 64 of the 299 differently expressed genes were shown to be directly involved in 24 pathways such as brassinosteroid biosynthesis, α-linolenic acid metabolism, phenylpropanoid biosynthesis, and nitrogen metabolism, all of which were influenced by γ-PGA. The analysis demonstrated that γ-PGA promoted nitrogen assimilation and biosynthesis of brassinosteroids, jasmonic acid, and lignins, providing a better explanation for why γ-PGA promotes growth and enhances stress tolerance in plants.

摘要

聚(γ-谷氨酸)(γ-PGA)能促进植物生长。然而,这种促进作用背后的分子机制尚未完全明确。因此,我们使用基因芯片微阵列来探究γ-PGA对拟南芥基因转录的影响。我们的结果显示有299个基因受到γ-PGA的显著调控。这些差异表达的基因主要参与代谢和细胞过程以及刺激反应。我们还研究了与这些差异表达基因相关的代谢途径。在299个差异表达基因中,共有64个被证明直接参与24条途径,如油菜素内酯生物合成、α-亚麻酸代谢、苯丙烷类生物合成和氮代谢,所有这些途径都受到γ-PGA的影响。分析表明,γ-PGA促进了氮同化以及油菜素内酯、茉莉酸和木质素的生物合成,这为γ-PGA促进植物生长和增强植物抗逆性提供了更好的解释。

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