Narang Dominic, Singh Anubhuti, Swasthi Hema M, Mukhopadhyay Samrat
Centre for Protein Science, Design and Engineering, Department of Biological Sciences and ‡Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) , Mohali, Knowledge City, Sector 81, S.A.S. Nagar, Mohali 140306, Punjab, India.
J Phys Chem B. 2016 Aug 18;120(32):7815-23. doi: 10.1021/acs.jpcb.6b05619. Epub 2016 Aug 8.
Misfolding and amyloid aggregation of human β2-microglobulin (β2m) have been linked to dialysis-related amyloidosis. Previous studies have shown that in the presence of different salt concentrations and at pH 2.5, β2m assembles into aggregates with distinct morphologies. However, the structural and mechanistic details of the aggregation of β2m, giving rise to different morphologies, are poorly understood. In this work, we have extensively characterized the salt-induced oligomers of the acid-unfolded state of β2m using an array of biophysical tools including steady-state and time-resolved fluorescence, circular dichroism, dynamic light scattering, and atomic force microscopy imaging. Fluorescence studies using the oligomer-sensitive molecular rotor, 4-(dicyanovinyl)-julolidine, in conjunction with the light scattering and cross-linking assay indicated that at low salt (NaCl) concentrations β2m exists as a disordered monomer, capable of transforming into ordered amyloid. In the presence of higher concentrations of salt, β2m aggregates into a larger oligomeric species that does not appear to transform into amyloid fibrils. Site-specific fluorescence experiments using single Trp variants of β2m revealed that the middle region of the protein is incorporated into these oligomers, whereas the C-terminal segment is highly exposed to bulk water. Additionally, stopped-flow kinetic experiments indicated that the formation of hydrophobic core and oligomerization occur concomitantly. Our results revealed the distinct pathways by which β2m assembles into oligomers and fibrils.
人β2-微球蛋白(β2m)的错误折叠和淀粉样聚集与透析相关淀粉样变性有关。先前的研究表明,在不同盐浓度和pH 2.5条件下,β2m会组装成具有不同形态的聚集体。然而,β2m聚集产生不同形态的结构和机制细节却知之甚少。在这项工作中,我们使用了一系列生物物理工具,包括稳态和时间分辨荧光、圆二色性、动态光散射和原子力显微镜成像,对β2m酸解折叠状态下盐诱导的寡聚体进行了广泛表征。使用对寡聚体敏感的分子转子4-(二氰乙烯基)-聚甲基吲哚并结合光散射和交联分析的荧光研究表明,在低盐(NaCl)浓度下,β2m以无序单体形式存在,能够转化为有序淀粉样蛋白。在较高盐浓度存在下,β2m聚集成更大的寡聚体物种,似乎不会转化为淀粉样纤维。使用β2m的单个色氨酸变体进行的位点特异性荧光实验表明,蛋白质的中间区域被纳入这些寡聚体中,而C末端片段则高度暴露于大量水中。此外,停流动力学实验表明,疏水核心的形成和寡聚化同时发生。我们的结果揭示了β2m组装成寡聚体和纤维的不同途径。