诺卡氏菌属菌株BMG111209的永久基因组序列草图，该放线菌从绿玉树根瘤中分离得到
Permanent Draft Genome Sequence of Nocardia sp. BMG111209, an Actinobacterium Isolated from Nodules of Casuarina glauca.
作者信息
Ghodhbane-Gtari Faten, Beauchemin Nicholas, Gueddou Abdellatif, Hezbri Karima, Ktari Amir, Louati Moussa, Nouioui Imen, Chen Amy, Huntemann Marcel, Ivanova Natalia, Kyrpides Nikos, Markowitz Victor, Mavrommatis Kostas, Pagani Ioanna, Sen Arnab, Wall Luis, Woyke Tanja, Gtari Maher, Tisa Louis S
机构信息
University of Tunis-El Manar, Tunis, Tunisia.
University of New Hampshire, Durham, New Hampshire, USA.
出版信息
Genome Announc. 2016 Aug 4;4(4):e00770-16. doi: 10.1128/genomeA.00770-16.
Abstract
Nocardia sp. strain BMG111209 is a non-Frankia actinobacterium isolated from root nodules of Casuarina glauca in Tunisia. Here, we report the 9.1-Mbp draft genome sequence of Nocardia sp. strain BMG111209 with a G + C content of 69.19% and 8,122 candidate protein-encoding genes.
摘要
诺卡氏菌属菌株BMG111209是从突尼斯的绿玉树根瘤中分离出的一种非弗兰克氏放线菌。在此，我们报告诺卡氏菌属菌株BMG111209的9.1兆碱基草图基因组序列，其G + C含量为69.19%，有8122个候选蛋白质编码基因。
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本文引用的文献
1
Endophytic Actinobacteria and the Interaction of Micromonospora and Nitrogen Fixing Plants.内生放线菌以及小单孢菌与固氮植物的相互作用
Front Microbiol. 2015 Dec 1;6:1341. doi: 10.3389/fmicb.2015.01341. eCollection 2015.
2
The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4).美国能源部联合基因组研究所微生物基因组注释流程（MGAP v.4）的标准操作程序。
Stand Genomic Sci. 2015 Oct 26;10:86. doi: 10.1186/s40793-015-0077-y. eCollection 2015.
3
Nocardia casuarinae sp. nov., an actinobacterial endophyte isolated from root nodules of Casuarina glauca.
Antonie Van Leeuwenhoek. 2014 Jun;105(6):1099-106. doi: 10.1007/s10482-014-0168-6. Epub 2014 Apr 9.
4
Micromonospora is a normal occupant of actinorhizal nodules.微单胞菌是放线菌根瘤的正常定植菌。
J Biosci. 2013 Nov;38(4):685-93. doi: 10.1007/s12038-013-9359-y.
5
High-quality draft assemblies of mammalian genomes from massively parallel sequence data.利用大规模平行测序数据生成高质量的哺乳动物基因组草图组装。
Proc Natl Acad Sci U S A. 2011 Jan 25;108(4):1513-8. doi: 10.1073/pnas.1017351108. Epub 2010 Dec 27.
6
IMG ER: a system for microbial genome annotation expert review and curation.IMG ER：一个用于微生物基因组注释专家评审和整理的系统。
Bioinformatics. 2009 Sep 1;25(17):2271-8. doi: 10.1093/bioinformatics/btp393. Epub 2009 Jun 27.
7
Micromonospora coriariae sp. nov., isolated from root nodules of Coriaria myrtifolia.新种杨梅小单孢菌，从南欧茱萸根瘤中分离得到。
Int J Syst Evol Microbiol. 2006 Oct;56(Pt 10):2381-2385. doi: 10.1099/ijs.0.64449-0.
8
The integrated microbial genomes (IMG) system.综合微生物基因组（IMG）系统
Nucleic Acids Res. 2006 Jan 1;34(Database issue):D344-8. doi: 10.1093/nar/gkj024.
9
Non-Frankia actinomycetes isolated from surface-sterilized roots of Casuarina equisetifolia fix nitrogen.从木麻黄表面消毒根部分离出的非弗兰克氏放线菌能固氮。
Appl Environ Microbiol. 2005 Jan;71(1):460-6. doi: 10.1128/AEM.71.1.460-466.2005.
10
Solexa Ltd.索雷克斯有限公司
Pharmacogenomics. 2004 Jun;5(4):433-8. doi: 10.1517/14622416.5.4.433.
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