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综合微生物基因组(IMG)系统

The integrated microbial genomes (IMG) system.

作者信息

Markowitz Victor M, Korzeniewski Frank, Palaniappan Krishna, Szeto Ernest, Werner Greg, Padki Anu, Zhao Xueling, Dubchak Inna, Hugenholtz Philip, Anderson Iain, Lykidis Athanasios, Mavromatis Konstantinos, Ivanova Natalia, Kyrpides Nikos C

机构信息

Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA, USA.

出版信息

Nucleic Acids Res. 2006 Jan 1;34(Database issue):D344-8. doi: 10.1093/nar/gkj024.

Abstract

The integrated microbial genomes (IMG) system is a new data management and analysis platform for microbial genomes provided by the Joint Genome Institute (JGI). IMG contains both draft and complete JGI genomes integrated with other publicly available microbial genomes of all three domains of life. IMG provides tools and viewers for analyzing genomes, genes and functions, individually or in a comparative context. IMG allows users to focus their analysis on subsets of genes and genomes of interest and to save the results of their analysis. IMG is available at http://img.jgi.doe.gov.

摘要

综合微生物基因组(IMG)系统是美国能源部联合基因组研究所(JGI)提供的一个用于微生物基因组的数据管理与分析新平台。IMG包含JGI的草图基因组和完整基因组,这些基因组与来自生命三个域的其他公开可用微生物基因组整合在一起。IMG提供了用于单独或在比较背景下分析基因组、基因和功能的工具及查看器。IMG允许用户将分析重点放在感兴趣的基因和基因组子集上,并保存其分析结果。可通过http://img.jgi.doe.gov访问IMG。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8809/1347387/78789020922d/gkj024f1.jpg

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