Carvalho Natalia D M, Carmo Edson, Neves Rogerio O, Schneider Carlos Henrique, Gross Maria Claudia
Laboratório de Citogenômica Animal, Universidade Federal do Amazonas, Instituto de Ciências Biológicas, Estrada do Contorno 3000, Aleixo, CEP 69077-000 - Manaus, AM - Brazil.
Laboratório de Tecnologia de DNA, Universidade Federal do Amazonas, Instituto de Ciências Biológicas, Estrada do Contorno 3000, Aleixo, CEP 69077-000 - Manaus, AM - Brazil.
Comp Cytogenet. 2016 Apr 6;10(2):203-17. doi: 10.3897/CompCytogen.v10i2.7081. eCollection 2016.
Differences in heterochromatin distribution patterns and its composition were observed in Amazonian teiid species. Studies have shown repetitive DNA harbors heterochromatic blocks which are located in centromeric and telomeric regions in Ameiva ameiva (Linnaeus, 1758), Kentropyx calcarata (Spix, 1825), Kentropyx pelviceps (Cope, 1868), and Tupinambis teguixin (Linnaeus, 1758). In Cnemidophorus sp.1, repetitive DNA has multiple signals along all chromosomes. The aim of this study was to characterize moderately and highly repetitive DNA sequences by C ot1-DNA from Ameiva ameiva and Cnemidophorus sp.1 genomes through cloning and DNA sequencing, as well as mapping them chromosomally to better understand its organization and genome dynamics. The results of sequencing of DNA libraries obtained by C ot1-DNA showed that different microsatellites, transposons, retrotransposons, and some gene families also comprise the fraction of repetitive DNA in the teiid species. FISH using C ot1-DNA probes isolated from both Ameiva ameiva and Cnemidophorus sp.1 showed these sequences mainly located in heterochromatic centromeric, and telomeric regions in Ameiva ameiva, Kentropyx calcarata, Kentropyx pelviceps, and Tupinambis teguixin chromosomes, indicating they play structural and functional roles in the genome of these species. In Cnemidophorus sp.1, C ot1-DNA probe isolated from Ameiva ameiva had multiple interstitial signals on chromosomes, whereas mapping of C ot1-DNA isolated from the Ameiva ameiva and Cnemidophorus sp.1 highlighted centromeric regions of some chromosomes. Thus, the data obtained showed that many repetitive DNA classes are part of the genome of Ameiva ameiva, Cnemidophorus sp.1, Kentroyx calcarata, Kentropyx pelviceps, and Tupinambis teguixin, and these sequences are shared among the analyzed teiid species, but they were not always allocated at the same chromosome position.
在亚马逊鞭尾蜥物种中观察到了异染色质分布模式及其组成的差异。研究表明,重复DNA包含异染色质块,这些异染色质块位于美洲鞭尾蜥(林奈,1758年)、尖吻鞭尾蜥(斯皮克斯,1825年)、臀斑鞭尾蜥(科普,1868年)和阿根廷黑白泰加蜥(林奈,1758年)的着丝粒和端粒区域。在某种南美蜥属物种中,重复DNA在所有染色体上都有多个信号。本研究的目的是通过从美洲鞭尾蜥和某种南美蜥属物种的基因组中克隆和DNA测序来表征中度和高度重复的DNA序列,并将它们进行染色体定位,以更好地了解其组织和基因组动态。通过Cot1-DNA获得的DNA文库测序结果表明,不同的微卫星、转座子、反转录转座子和一些基因家族也构成了鞭尾蜥物种中重复DNA的一部分。使用从美洲鞭尾蜥和某种南美蜥属物种中分离出的Cot1-DNA探针进行荧光原位杂交显示,这些序列主要位于美洲鞭尾蜥、尖吻鞭尾蜥、臀斑鞭尾蜥和阿根廷黑白泰加蜥染色体的异染色质着丝粒和端粒区域,表明它们在这些物种的基因组中发挥着结构和功能作用。在某种南美蜥属物种中,从美洲鞭尾蜥分离出的Cot1-DNA探针在染色体上有多个间隙信号,而从美洲鞭尾蜥和某种南美蜥属物种中分离出的Cot1-DNA的定位突出了一些染色体的着丝粒区域。因此,获得的数据表明,许多重复DNA类别是美洲鞭尾蜥、某种南美蜥属物种、尖吻鞭尾蜥、臀斑鞭尾蜥和阿根廷黑白泰加蜥基因组的一部分,并且这些序列在所分析的鞭尾蜥物种中是共享的,但它们并不总是位于相同的染色体位置。