Qin Peng, Lin Yu, Hu Yaodong, Liu Kun, Mao Shuangshuang, Li Zhanyi, Wang Jirui, Liu Yaxi, Wei Yuming, Zheng Youliang
Triticeae Research Institute, Sichuan Agricultural University, Wenjiang, Chengdu, China.
College of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, China.
Genet Mol Biol. 2016 Jul-Sep;39(3):398-407. doi: 10.1590/1678-4685-GMB-2015-0232. Epub 2016 Jul 7.
The D-genome progenitor of wheat (Triticum aestivum), Aegilops tauschii, possesses numerous genes for resistance to abiotic stresses, including drought. Therefore, information on the genetic architecture of A. tauschii can aid the development of drought-resistant wheat varieties. Here, we evaluated 13 traits in 373 A. tauschii accessions grown under normal and polyethylene glycol-simulated drought stress conditions and performed a genome-wide association study using 7,185 single nucleotide polymorphism (SNP) markers. We identified 208 and 28 SNPs associated with all traits using the general linear model and mixed linear model, respectively, while both models detected 25 significant SNPs with genome-wide distribution. Public database searches revealed several candidate/flanking genes related to drought resistance that were grouped into three categories according to the type of encoded protein (enzyme, storage protein, and drought-induced protein). This study provided essential information for SNPs and genes related to drought resistance in A. tauschii and wheat, and represents a foundation for breeding drought-resistant wheat cultivars using marker-assisted selection.
小麦(普通小麦)的D基因组祖先节节麦拥有众多抗非生物胁迫(包括干旱)的基因。因此,节节麦遗传结构的相关信息有助于抗旱小麦品种的培育。在此,我们评估了373份节节麦种质在正常条件和聚乙二醇模拟干旱胁迫条件下生长的13个性状,并使用7185个单核苷酸多态性(SNP)标记进行了全基因组关联研究。我们分别使用一般线性模型和混合线性模型鉴定出与所有性状相关的208个和28个SNP,而两种模型均检测到25个具有全基因组分布的显著SNP。通过公共数据库搜索发现了几个与抗旱性相关的候选/侧翼基因,这些基因根据编码蛋白的类型(酶、贮藏蛋白和干旱诱导蛋白)分为三类。本研究为节节麦和小麦中与抗旱性相关的SNP和基因提供了重要信息,为利用标记辅助选择培育抗旱小麦品种奠定了基础。