HybridStat Predictive Analytics, Aiolou 19, Athens 10551, Greece.
Biomedical Sciences Research Center 'Alexander Fleming', Fleming 34, Vari 16672, Greece.
Sci Data. 2016 Aug 30;3:160073. doi: 10.1038/sdata.2016.73.
The cells of prothoracic glands (PG) are the main site of synthesis and secretion of ecdysteroids, the biochemical products of cholesterol conversion to steroids that shape the morphogenic development of insects. Despite the availability of genome sequences from several insect species and the extensive knowledge of certain signalling pathways that underpin ecdysteroidogenesis, the spectrum of signalling molecules and ecdysteroidogenic cascades is still not fully comprehensive. To fill this gap and obtain the complete list of cell membrane receptors expressed in PG cells, we used combinatory bioinformatic, proteomic and transcriptomic analysis and quantitative PCR to annotate and determine the expression profiles of genes identified as putative cell membrane receptors of the model insect species, Bombyx mori, and subsequently enrich the repertoire of signalling pathways that are present in its PG cells. The genome annotation dataset we report here highlights modules and pathways that may be directly involved in ecdysteroidogenesis and aims to disseminate data and assist other researchers in the discovery of the role of such receptors and their ligands.
前胸腺细胞(PG)是蜕皮甾类物质合成和分泌的主要场所,蜕皮甾类物质是胆固醇转化为甾醇的生化产物,可塑造昆虫的形态发生发育。尽管有几种昆虫物种的基因组序列和某些信号通路的广泛知识为基础,这些信号通路对蜕皮甾类物质的形成起作用,但信号分子和蜕皮甾类物质生成级联的范围仍不完全全面。为了填补这一空白并获得 PG 细胞中表达的完整细胞膜受体列表,我们使用组合生物信息学、蛋白质组学和转录组学分析以及定量 PCR 来注释和确定鉴定为模型昆虫物种家蚕的细胞膜受体的基因的表达谱,随后丰富其 PG 细胞中存在的信号通路库。我们在此报告的基因组注释数据集突出了可能直接参与蜕皮甾类物质形成的模块和途径,并旨在传播数据并协助其他研究人员发现此类受体及其配体的作用。