Swammerdam Institute for Life Sciences, Universiteit van Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands.
Max Planck Institute for Plant Breeding Research, Department Plant Developmental Biology, Carl-von-Linné-Weg 10, 50829 Köln, Germany.
Trends Plant Sci. 2016 Nov;21(11):974-987. doi: 10.1016/j.tplants.2016.07.013. Epub 2016 Sep 2.
Higher eukaryotes typically contain many different cell types, displaying different cellular functions that are influenced by biotic and abiotic cues. The different functions are characterized by specific gene expression patterns mediated by regulatory sequences such as transcriptional enhancers. Recent genome-wide approaches have identified thousands of enhancers in animals, reviving interest in enhancers in gene regulation. Although the regulatory roles of plant enhancers are as crucial as those in animals, genome-wide approaches have only very recently been applied to plants. Here we review characteristics of enhancers at the DNA and chromatin level in plants and other species, their similarities and differences, and techniques widely used for genome-wide discovery of enhancers in animal systems that can be implemented in plants.
高等真核生物通常包含许多不同的细胞类型,表现出不同的细胞功能,这些功能受到生物和非生物线索的影响。不同的功能由调节序列(如转录增强子)介导的特定基因表达模式来表征。最近的全基因组方法已经在动物中鉴定了数千个增强子,这重新引起了人们对基因调控中增强子的兴趣。尽管植物增强子的调节作用与动物中的增强子一样至关重要,但全基因组方法直到最近才被应用于植物。在这里,我们综述了植物和其他物种中 DNA 和染色质水平上增强子的特征、它们的相似性和差异,以及广泛用于动物系统中全基因组发现增强子的技术,这些技术可以在植物中实施。