Gilbert Maarten J, Miller William G, Yee Emma, Kik Marja, Zomer Aldert L, Wagenaar Jaap A, Duim Birgitta
Department of Infectious Diseases and Immunology, Faculty of Veterinary Medicine, Utrecht University, Utrecht, The Netherlands.
Produce Safety and Microbiology Research Unit, Agricultural Research Service, U.S. Department of Agriculture, Albany, California, USA.
Genome Biol Evol. 2016 Oct 5;8(9):3022-3029. doi: 10.1093/gbe/evw218.
Campylobacter iguaniorum is most closely related to the species C fetus, C hyointestinalis, and C lanienae Reptiles, chelonians and lizards in particular, appear to be a primary reservoir of this Campylobacter species. Here we report the genome comparison of C iguaniorum strain 1485E, isolated from a bearded dragon (Pogona vitticeps), and strain 2463D, isolated from a green iguana (Iguana iguana), with the genomes of closely related taxa, in particular with reptile-associated C fetus subsp. testudinum In contrast to C fetus, C iguaniorum is lacking an S-layer encoding region. Furthermore, a defined lipooligosaccharide biosynthesis locus, encoding multiple glycosyltransferases and bounded by waa genes, is absent from C iguaniorum Instead, multiple predicted glycosylation regions were identified in C iguaniorum One of these regions is > 50 kb with deviant G + C content, suggesting acquisition via lateral transfer. These similar, but non-homologous glycosylation regions were located at the same position on the genome in both strains. Multiple genes encoding respiratory enzymes not identified to date within the C. fetus clade were present. C iguaniorum shared highest homology with C hyointestinalis and C fetus. As in reptile-associated C fetus subsp. testudinum, a putative tricarballylate catabolism locus was identified. However, despite colonizing a shared host, no recent recombination between both taxa was detected. This genomic study provides a better understanding of host adaptation, virulence, phylogeny, and evolution of C iguaniorum and related Campylobacter taxa.
鬣蜥弯曲杆菌与胎儿弯曲杆菌、猪肠弯曲杆菌和拉涅弯曲杆菌最为密切相关。爬行动物,尤其是龟类和蜥蜴,似乎是这种弯曲杆菌的主要宿主。在此,我们报告了从鬃狮蜥(鬃狮蜥)分离出的鬣蜥弯曲杆菌菌株1485E和从绿鬣蜥(绿鬣蜥)分离出的菌株2463D与密切相关分类群的基因组比较,特别是与爬行动物相关的胎儿弯曲杆菌亚种龟亚种的基因组比较。与胎儿弯曲杆菌不同,鬣蜥弯曲杆菌缺乏一个S层编码区域。此外,鬣蜥弯曲杆菌中不存在一个明确的脂寡糖生物合成位点,该位点编码多种糖基转移酶并由waa基因界定。相反,在鬣蜥弯曲杆菌中鉴定出多个预测的糖基化区域。其中一个区域大于50 kb,G + C含量异常,表明是通过横向转移获得的。这些相似但非同源的糖基化区域在两个菌株的基因组中位于相同位置。存在多个编码至今未在胎儿弯曲杆菌进化枝中鉴定出的呼吸酶的基因。鬣蜥弯曲杆菌与猪肠弯曲杆菌和胎儿弯曲杆菌具有最高的同源性。与爬行动物相关的胎儿弯曲杆菌亚种龟亚种一样,鉴定出一个假定的三羧酸盐分解代谢位点。然而,尽管在共同宿主中定殖,但未检测到这两个分类群之间最近的重组。这项基因组研究有助于更好地理解鬣蜥弯曲杆菌及相关弯曲杆菌分类群的宿主适应性、毒力、系统发育和进化。