Guo Zhiling, Zhang Huan, Liu Sheng, Lin Senjie
Key Laboratory of Tropical Marine Bio-resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Science, Guangzhou 510301, China.
University of Chinese Academy of Sciences, Beijing 100049, China.
Microorganisms. 2013 Oct 21;1(1):33-57. doi: 10.3390/microorganisms1010033.
Heterotrophic dinoflagellates are prevalent protists in marine environments, which play an important role in the carbon cycling and energy flow in the marine planktonic community. (Dinophyceae), a widespread heterotrophic dinoflagellate, is a model species used for a broad range of ecological, biogeographic, and evolutionary studies. Despite the increasing research effort on this species, there lacks a synthesis of the existing data and a coherent picture of this organism. Here we reviewed the literature to provide an overview of what is known regarding the biology of . , and identify areas where further studies are needed. As an early branch of the dinoflagellate lineage, . shares similarity with typical dinoflagellates in permanent condensed chromosomes, less abundant nucleosome proteins compared to other eukaryotes, multiple gene copies, the occurrence of -splicing in nucleus-encoded mRNAs, highly fragmented mitochondrial genome, and disuse of ATG as a start codon for mitochondrial genes. On the other hand, also exhibits some distinct cytological features (e.g., different flagellar structure, absence of girdle and sulcus or pustules, use of intranuclear spindle in mitosis, presence of nuclear plaque, and absence of birefringent periodic banded chromosomal structure) and genetic features (e.g., a single histone-like DNA-associated protein, - gene fusion, 5' oligo-U cap in the mitochondrial transcripts of protein-coding genes, the absence of mRNA editing, the presence of stop codon in the fused - mRNA produced by post-transcriptional oligoadenylation, and vestigial plastid genes). The best-studied biology of this dinoflagellate is probably the prey and predators types, which include a wide range of organisms. On the other hand, the abundance of this species in the natural waters and its controlling factors, genome organization and gene expression regulation that underlie the unusual cytological and ecological characteristics are among the areas that urgently need study.
异养甲藻是海洋环境中普遍存在的原生生物,在海洋浮游生物群落的碳循环和能量流动中发挥着重要作用。(甲藻纲)是一种广泛分布的异养甲藻,是用于广泛的生态、生物地理和进化研究的模式物种。尽管对该物种的研究力度不断加大,但仍缺乏对现有数据的综合以及对该生物体的连贯认识。在此,我们回顾了文献,以概述关于的生物学已知内容,并确定需要进一步研究的领域。作为甲藻谱系的早期分支,与典型甲藻在永久浓缩染色体、与其他真核生物相比核小体蛋白含量较少、多个基因拷贝、核编码mRNA中存在剪接、高度碎片化的线粒体基因组以及不使用ATG作为线粒体基因的起始密码子等方面具有相似性。另一方面,也表现出一些独特的细胞学特征(例如,不同的鞭毛结构、没有腰带和沟或脓疱、有丝分裂中使用核内纺锤体、存在核斑以及没有双折射周期性带状染色体结构)和遗传特征(例如,一种单一的组蛋白样DNA相关蛋白、基因融合、蛋白质编码基因的线粒体转录本中有5'寡聚-U帽、没有mRNA编辑、转录后寡聚腺苷化产生的融合mRNA中存在终止密码子以及残留的质体基因)。对这种甲藻研究最多的生物学方面可能是猎物和捕食者类型,其中包括广泛的生物体。另一方面,该物种在天然水域中的丰度及其控制因素、构成异常细胞学和生态特征基础的基因组组织和基因表达调控等领域迫切需要研究。