Takemoto Kazuhiro, Ii Masato, Nishizuka Satoshi S
Department of Bioscience and Bioinformatics , Kyushu Institute of Technology , Iizuka, Fukuoka 820-8502 , Japan.
Molecular Therapeutics Laboratory, Department of Surgery , Iwate Medical University School of Medicine , Morioka, Iwate 020-8505 , Japan.
R Soc Open Sci. 2016 Sep 7;3(9):160267. doi: 10.1098/rsos.160267. eCollection 2016 Sep.
Elucidation of tumour suppression mechanisms is a major challenge in cancer biology. Therefore, Peto's paradox, or low cancer incidence in large animals, has attracted focus. According to the gene-abundance hypothesis, which considers the increase/decrease in cancer-related genes with body size, researchers evaluated the associations between gene abundance and body size. However, previous studies only focused on a few specific gene functions and have ignored the alternative hypothesis (metabolic rate hypothesis): in this hypothesis, the cellular metabolic rate and subsequent oxidative stress decreases with increasing body size. In this study, we have elected to explore the gene-abundance hypothesis taking into account the metabolic rate hypothesis. Thus, we comprehensively investigated the correlation between the number of genes in various functional categories and body size while at the same time correcting for the mass-specific metabolic rate (). A number of gene functions that correlated with body size were initially identified, but they were found to be artefactual due to the decrease in with increasing body size. By contrast, immune system-related genes were found to increase with increasing body size when the correlation included this correction for . These findings support the gene-abundance hypothesis and emphasize the importance of also taking into account the metabolic rate when evaluating gene abundance-body size relationships. This finding may be useful for understanding cancer evolution and tumour suppression mechanisms as well as for determining cancer-related genes and functions.
阐明肿瘤抑制机制是癌症生物学中的一项重大挑战。因此,佩托悖论,即大型动物癌症发病率低的现象,已引起关注。根据基因丰度假说,该假说考虑了与体型相关的癌症相关基因的增加/减少,研究人员评估了基因丰度与体型之间的关联。然而,以往的研究仅关注少数特定的基因功能,而忽略了另一种假说(代谢率假说):在该假说中,细胞代谢率及随后的氧化应激会随着体型的增大而降低。在本研究中,我们选择在考虑代谢率假说的情况下探索基因丰度假说。因此,我们全面研究了各种功能类别的基因数量与体型之间的相关性,同时校正了质量特异性代谢率()。最初确定了一些与体型相关的基因功能,但由于随着体型增大而降低,发现它们是人为造成的。相比之下,当相关性包括对的这种校正时,发现与免疫系统相关的基因随着体型的增大而增加。这些发现支持了基因丰度假说,并强调在评估基因丰度与体型关系时考虑代谢率的重要性。这一发现可能有助于理解癌症进化和肿瘤抑制机制,以及确定癌症相关基因和功能。