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靶向测序与免疫分析揭示原发性免疫缺陷基因与儿童炎症性肠病的关联:一项日本多中心研究

Targeted Sequencing and Immunological Analysis Reveal the Involvement of Primary Immunodeficiency Genes in Pediatric IBD: a Japanese Multicenter Study.

作者信息

Suzuki Tasuku, Sasahara Yoji, Kikuchi Atsuo, Kakuta Humihiko, Kashiwabara Toshihiko, Ishige Takashi, Nakayama Yoshiko, Tanaka Masanori, Hoshino Akihiro, Kanegane Hirokazu, Abukawa Daiki, Kure Shigeo

机构信息

Department of Pediatrics, Tohoku University Graduate School of Medicine, 1-1 Seiryo-machi, Aoba-ku, Sendai, Miyagi, 980-8574, Japan.

Department of General Pediatrics, Miyagi Children's Hospital, Sendai, Miyagi, Japan.

出版信息

J Clin Immunol. 2017 Jan;37(1):67-79. doi: 10.1007/s10875-016-0339-5. Epub 2016 Oct 17.

DOI:10.1007/s10875-016-0339-5
PMID:27747465
Abstract

PURPOSE

Pediatric inflammatory bowel disease (IBD) is a heterogeneous disorder caused by multiple factors. Although genetic and immunological analyses are required for a definitive diagnosis, no reports of a comprehensive genetic study of a Japanese population are available.

METHODS

In total, 35 Japanese patients <16 years of age suffering from IBD, including 27 patients aged <6 years with very early-onset IBD, were enrolled in this multicenter study. Exome and targeted gene panel sequencing was performed for all patients. Mutations in genes responsible for primary immunodeficiency diseases (PID) and clinical and immunological parameters were evaluated according to disease type.

RESULTS

We identified monogenic mutations in 5 of the 35 patients (14.3 %). We identified compound heterozygous and homozygous splice-site mutations in interleukin-10 receptor A (IL-10RA) in two patients, nonsense mutations in X-linked inhibitor of apoptosis protein (XIAP) in two patients, and a missense mutation in cytochrome b beta chain in one patient. Using assays for protein expression levels, IL-10 signaling, and cytokine production, we confirmed that the mutations resulted in loss of function. For each patient, genotype was significantly associated with clinical findings. We successfully treated a patient with a XIAP mutation by allogeneic cord blood hematopoietic stem cell transplantation, and his symptoms were ameliorated completely.

CONCLUSIONS

Targeted sequencing and immunological analysis are useful for screening monogenic disorders and selecting curative therapies in pediatric patients with IBD. The genes responsible for PID are frequently involved in pediatric IBD and play critical roles in normal immune homeostasis in the gastrointestinal tract.

摘要

目的

儿童炎症性肠病(IBD)是一种由多种因素引起的异质性疾病。尽管明确诊断需要进行基因和免疫分析,但尚无关于日本人群全面基因研究的报道。

方法

本多中心研究共纳入35例16岁以下的日本IBD患者,其中包括27例6岁以下的极早发型IBD患者。对所有患者进行外显子组和靶向基因panel测序。根据疾病类型评估原发性免疫缺陷病(PID)相关基因的突变以及临床和免疫参数。

结果

我们在35例患者中的5例(14.3%)中鉴定出单基因变异。我们在2例患者中鉴定出白细胞介素10受体A(IL-10RA)的复合杂合和纯合剪接位点变异,在2例患者中鉴定出X连锁凋亡抑制蛋白(XIAP)的无义变异,在1例患者中鉴定出细胞色素bβ链的错义变异。通过蛋白质表达水平、IL-10信号传导和细胞因子产生的检测,我们证实这些变异导致功能丧失。对于每例患者,基因型与临床发现显著相关。我们通过异基因脐血造血干细胞移植成功治疗了1例XIAP变异患者,其症状完全缓解。

结论

靶向测序和免疫分析有助于筛查儿童IBD患者的单基因疾病并选择治愈性治疗方法。PID相关基因经常参与儿童IBD,并在胃肠道正常免疫稳态中起关键作用。

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本文引用的文献

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Exome sequencing analysis reveals variants in primary immunodeficiency genes in patients with very early onset inflammatory bowel disease.外显子组测序分析揭示了极早发型炎症性肠病患者原发性免疫缺陷基因中的变异。
Gastroenterology. 2015 Nov;149(6):1415-24. doi: 10.1053/j.gastro.2015.07.006. Epub 2015 Jul 17.
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Dissecting Allele Architecture of Early Onset IBD Using High-Density Genotyping.利用高密度基因分型剖析早发性炎症性肠病的等位基因结构
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一名患有严重克罗恩病和复发性皮肤感染的17岁男性X连锁淋巴增殖综合征2型的延迟诊断
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Front Immunol. 2023 Apr 21;14:1095267. doi: 10.3389/fimmu.2023.1095267. eCollection 2023.
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Clin Immunol. 2022 Jul;240:109047. doi: 10.1016/j.clim.2022.109047. Epub 2022 May 22.
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Primary Immunodeficiencies Associated With Early-Onset Inflammatory Bowel Disease in Southeast and East Asia.与东南亚和东亚早发性炎症性肠病相关的原发性免疫缺陷。
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