Zadesenets Kira S, Vizoso Dita B, Schlatter Aline, Konopatskaia Irina D, Berezikov Eugene, Schärer Lukas, Rubtsov Nikolay B
Evolutionary Biology, Zoological Institute, University of Basel, Basel, Switzerland.
Institute of Cytology and Genetics SB RAS, Novosibirsk, Russian Federation.
PLoS One. 2016 Oct 18;11(10):e0164915. doi: 10.1371/journal.pone.0164915. eCollection 2016.
Over the past decade, the free-living flatworm Macrostomum lignano has been successfully used in many areas of biology, including embryology, stem cells, sexual selection, bioadhesion and aging. The increased use of this powerful laboratory model, including the establishment of genomic resources and tools, makes it essential to have a detailed description of the chromosome organization of this species, previously suggested to have a karyotype with 2n = 8 and one pair of large and three pairs of small metacentric chromosomes. We performed cytogenetic analyses for chromosomes of one commonly used inbred line of M. lignano (called DV1) and uncovered unexpected chromosome number variation in the form of aneuploidies of the largest chromosomes. These results prompted us to perform karyotypic studies in individual specimens of this and other lines of M. lignano reared under laboratory conditions, as well as in freshly field-collected specimens from different natural populations. Our analyses revealed a high frequency of aneuploids and in some cases other numerical and structural chromosome abnormalities in laboratory-reared lines of M. lignano, and some cases of aneuploidy were also found in freshly field-collected specimens. Moreover, karyological analyses were performed in specimens of three further species: Macrostomum sp. 8 (a close relative of M. lignano), M. spirale and M. hystrix. Macrostomum sp. 8 showed a karyotype that was similar to that of M. lignano, with tetrasomy for its largest chromosome being the most common karyotype, while the other two species showed a simpler karyotype that is more typical of the genus Macrostomum. These findings suggest that M. lignano and Macrostomum sp. 8 can be used as new models for studying processes of partial genome duplication in genome evolution.
在过去十年中,自由生活的扁形虫利氏大颚虫已成功应用于生物学的许多领域,包括胚胎学、干细胞、性选择、生物黏附及衰老研究。随着这种强大实验室模型的使用增加,包括基因组资源和工具的建立,详细描述该物种的染色体组织变得至关重要,此前认为其核型为2n = 8,有一对大的和三对小的中着丝粒染色体。我们对利氏大颚虫一个常用近交系(称为DV1)的染色体进行了细胞遗传学分析,发现最大染色体存在非整倍体形式的意外染色体数目变异。这些结果促使我们对在实验室条件下饲养的该品系及其他利氏大颚虫品系的个体标本,以及从不同自然种群新采集的野外标本进行核型研究。我们的分析揭示,在实验室饲养的利氏大颚虫品系中,非整倍体的频率很高,在某些情况下还存在其他染色体数目和结构异常,在新采集的野外标本中也发现了一些非整倍体情况。此外,还对另外三个物种的标本进行了核型分析:大颚虫8号种(利氏大颚虫的近亲)、旋形大颚虫和猬形大颚虫。大颚虫8号种的核型与利氏大颚虫相似,其最大染色体的四体性是最常见的核型,而另外两个物种的核型更简单,是大颚虫属更典型的核型。这些发现表明,利氏大颚虫和大颚虫8号种可作为研究基因组进化中部分基因组复制过程的新模型。