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嗜热耐热菌 Thermopolyspora flexuosa GH10 木聚糖酶在生物质溶解离子液体中的高稳定性和低竞争性抑制。

High stability and low competitive inhibition of thermophilic Thermopolyspora flexuosa GH10 xylanase in biomass-dissolving ionic liquids.

机构信息

Department of Biotechnology and Chemical Technology, School of Chemical Technology, Aalto University, P.O. Box 16100, 00076, Aalto, Finland.

VTT-Technical Research Centre of Finland, P.O. Box 1000, FI02044 VTT, Espoo, Finland.

出版信息

Appl Microbiol Biotechnol. 2017 Feb;101(4):1487-1498. doi: 10.1007/s00253-016-7922-9. Epub 2016 Oct 21.

Abstract

Thermophilic Thermopolyspora flexuosa GH10 xylanase (TfXYN10A) was studied in the presence of biomass-dissolving hydrophilic ionic liquids (ILs) [EMIM]OAc, [EMIM]DMP and [DBNH]OAc. The temperature optimum of TfXYN10A with insoluble xylan in the pulp was at 65-70 °C, with solubilised 1 % xylan at 70-75 °C and with 3 % xylan at 75-80 °C. Therefore, the amount of soluble substrate affects the enzyme activity at high temperatures. The experiments with ILs were done with 1 % substrate. TfXYN10A can partially hydrolyse soluble xylan even in the presence of 40 % (v/v) ILs. Although ILs decrease the apparent temperature optimum, a surprising finding was that at the inactivating temperatures (80-90 °C), especially [EMIM]OAc increases the stability of TfXYN10A indicating that the binding of IL molecules strengthens the protein structure. Earlier kinetic studies showed an increased K with ILs, indicating that ILs function as competitive inhibitors. TfXYN10A showed low increase of K , which was 2-, 3- and 4-fold with 15 % [EMIM]OAc, [DBNH]OAc and [EMIM]DMP, respectively. One reason for the low competitive inhibition could be the high affinity to the substrate (low K ). Xylanases with low K (1 mg/mL) appear to show higher tolerance to ILs than xylanases with higher K (2 mg/mL). Capillary electrophoresis showed that TfXYN10A hydrolyses xylan to the end-products in 15-35 % ILs practically as completely as without IL, also indicating good binding of the short substrate molecules by TfXYN10A despite of major apparent IL binding sites above the catalytic residues. Substrate binding interactions in the active site appear to explain the high tolerance of TfXYN10A to ILs.

摘要

嗜热耐热菌 Thermopolyspora flexuosa GH10 木聚糖酶(TfXYN10A)在生物质溶解亲水性离子液体(ILs)[EMIM]OAc、[EMIM]DMP 和 [DBNH]OAc 的存在下进行了研究。TfXYN10A 在纸浆中不溶性木聚糖的最适温度为 65-70°C,在 1%木聚糖溶液中为 70-75°C,在 3%木聚糖中为 75-80°C。因此,可溶性底物的量会影响高温下的酶活性。用 ILs 进行的实验使用了 1%的底物。TfXYN10A 甚至在 40%(v/v)ILs 的存在下也可以部分水解可溶性木聚糖。尽管 ILs 降低了表观最适温度,但令人惊讶的发现是,在失活温度(80-90°C)下,特别是[EMIM]OAc 增加了 TfXYN10A 的稳定性,表明 IL 分子的结合增强了蛋白质结构。早期的动力学研究表明,随着 ILs 的增加,K 值也增加,表明 ILs 作为竞争性抑制剂发挥作用。TfXYN10A 显示出 K 值的低增加,用 15%[EMIM]OAc、[DBNH]OAc 和[EMIM]DMP 分别增加了 2 倍、3 倍和 4 倍。竞争性抑制作用低的一个原因可能是对底物的高亲和力(低 K 值)。与 K 值较高的木聚糖酶(2mg/mL)相比,K 值较低的木聚糖酶(1mg/mL)似乎对 ILs 的耐受性更高。毛细管电泳显示,TfXYN10A 在 15-35%ILs 中实际上可以像没有 ILs 一样完全将木聚糖水解为末端产物,这也表明尽管在催化残基上方有明显的 IL 结合位点,但 TfXYN10A 仍能很好地结合短的底物分子。在活性位点中,底物结合相互作用似乎可以解释 TfXYN10A 对 ILs 的高耐受性。

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