Johnson G J, Buckworth R C, Lee H, Morgan J A T, Ovenden J R, McMahon C R
Department of Primary Industry and Fisheries, Aquatic Resource Research Unit, G. P. O Box 3000, Darwin, NT, 0801, Australia.
CSIRO Oceans and Atmosphere Flagship, PMB 44 Winnellie, Darwin, NT, 0822, Australia.
J Fish Biol. 2017 Jan;90(1):39-60. doi: 10.1111/jfb.13102. Epub 2016 Oct 24.
Multivariate and machine-learning methods were used to develop field identification techniques for two species of cryptic blacktip shark. From 112 specimens, precaudal vertebrae (PCV) counts and molecular analysis identified 95 Australian blacktip sharks Carcharhinus tilstoni and 17 common blacktip sharks Carcharhinus limbatus. Molecular analysis also revealed 27 of the 112 were C. tilstoni × C. limbatus hybrids, of which 23 had C. tilstoni PCV counts and four had C. limbatus PCV counts. In the absence of further information about hybrid phenotypes, hybrids were assigned as either C. limbatus or C. tilstoni based on PCV counts. Discriminant analysis achieved 80% successful identification, but machine-learning models were better, achieving 100% successful identification, using six key measurements (fork length, caudal-fin peduncle height, interdorsal space, second dorsal-fin height, pelvic-fin length and pelvic-fin midpoint to first dorsal-fin insertion). Furthermore, pelvic-fin markings could be used for identification: C. limbatus has a distinct black mark >3% of the total pelvic-fin area, while C. tilstoni has markings with diffuse edges, or has smaller or no markings. Machine learning and pelvic-fin marking identification methods were field tested achieving 87 and 90% successful identification, respectively. With further refinement, the techniques developed here will form an important part of a multi-faceted approach to identification of C. tilstoni and C. limbatus and have a clear management and conservation application to these commercially important sharks. The methods developed here are broadly applicable and can be used to resolve species identities in many fisheries where cryptic species exist.
运用多变量和机器学习方法,开发了两种隐匿型黑鳍鲨的现场识别技术。在112个标本中,通过尾前椎骨(PCV)计数和分子分析,确定了95条澳大利亚黑鳍鲨(Carcharhinus tilstoni)和17条普通黑鳍鲨(Carcharhinus limbatus)。分子分析还显示,112个标本中有27个是澳大利亚黑鳍鲨和普通黑鳍鲨的杂交种,其中23个具有澳大利亚黑鳍鲨的PCV计数,4个具有普通黑鳍鲨的PCV计数。在缺乏关于杂交种表型的更多信息的情况下,根据PCV计数将杂交种归类为普通黑鳍鲨或澳大利亚黑鳍鲨。判别分析的成功识别率为80%,但机器学习模型表现更好,利用六个关键测量值(叉长、尾鳍柄高度、背鳍间距离、第二背鳍高度、腹鳍长度以及腹鳍中点到第一背鳍插入点的距离)实现了100%的成功识别。此外,腹鳍斑纹可用于识别:普通黑鳍鲨在腹鳍总面积的3%以上有明显的黑色斑纹,而澳大利亚黑鳍鲨的斑纹边缘模糊,或者斑纹较小或没有斑纹。机器学习和腹鳍斑纹识别方法在现场进行了测试,成功识别率分别为87%和90%。经过进一步完善,这里开发的技术将成为多方面识别澳大利亚黑鳍鲨和普通黑鳍鲨方法的重要组成部分,并对这些具有商业重要性的鲨鱼具有明确的管理和保护应用价值。这里开发的方法具有广泛的适用性,可用于解决许多存在隐匿物种的渔业中的物种识别问题。