Suppr超能文献

红细胞能量代谢途径遗传的多组学证据

Multi-omics Evidence for Inheritance of Energy Pathways in Red Blood Cells.

作者信息

Weisenhorn Erin M M, van T Erve Thomas J, Riley Nicholas M, Hess John R, Raife Thomas J, Coon Joshua J

机构信息

From the ‡Integrated Program in Biochemistry.

§Biomolecular Chemistry.

出版信息

Mol Cell Proteomics. 2016 Dec;15(12):3614-3623. doi: 10.1074/mcp.M116.062349. Epub 2016 Oct 24.

Abstract

Each year over 90 million units of blood are transfused worldwide. Our dependence on this blood supply mandates optimized blood management and storage. During storage, red blood cells undergo degenerative processes resulting in altered metabolic characteristics which may make blood less viable for transfusion. However, not all stored blood spoils at the same rate, a difference that has been attributed to variable rates of energy usage and metabolism in red blood cells. Specific metabolite abundances are heritable traits; however, the link between heritability of energy metabolism and red blood cell storage profiles is unclear. Herein we performed a comprehensive metabolomics and proteomics study of red blood cells from 18 mono- and di-zygotic twin pairs to measure heritability and identify correlations with ATP and other molecular indices of energy metabolism. Without using affinity-based hemoglobin depletion, our work afforded the deepest multi-omic characterization of red blood cell membranes to date (1280 membrane proteins and 330 metabolites), with 119 membrane protein and 148 metabolite concentrations found to be over 30% heritable. We demonstrate a high degree of heritability in the concentration of energy metabolism metabolites, especially glycolytic metabolites. In addition to being heritable, proteins and metabolites involved in glycolysis and redox metabolism are highly correlated, suggesting that crucial energy metabolism pathways are inherited en bloc at distinct levels. We conclude that individuals can inherit a phenotype composed of higher or lower concentrations of these proteins together. This can result in vastly different red blood cells storage profiles which may need to be considered to develop precise and individualized storage options. Beyond guiding proper blood storage, this intimate link in heritability between energy and redox metabolism pathways may someday prove useful in determining the predisposition of an individual toward metabolic diseases.

摘要

全球每年输血超过9000万单位。我们对这种血液供应的依赖要求优化血液管理和储存。在储存过程中,红细胞会经历退化过程,导致代谢特征改变,这可能会使血液在输血时的生存能力降低。然而,并非所有储存的血液都以相同的速度变质,这种差异归因于红细胞能量使用和代谢的不同速率。特定代谢物丰度是可遗传的性状;然而,能量代谢的遗传性与红细胞储存特征之间的联系尚不清楚。在此,我们对18对单卵和双卵双胞胎的红细胞进行了全面的代谢组学和蛋白质组学研究,以测量遗传性并确定与ATP和其他能量代谢分子指标的相关性。在不使用基于亲和力的血红蛋白去除方法的情况下,我们的工作提供了迄今为止对红细胞膜最深层次的多组学表征(1280种膜蛋白和330种代谢物),发现119种膜蛋白和148种代谢物浓度具有超过30%的遗传性。我们证明了能量代谢代谢物浓度具有高度遗传性,尤其是糖酵解代谢物。除了具有遗传性外,参与糖酵解和氧化还原代谢的蛋白质和代谢物高度相关,这表明关键的能量代谢途径在不同水平上整体遗传。我们得出结论,个体可以共同遗传由这些蛋白质浓度较高或较低组成的表型。这可能导致截然不同的红细胞储存特征,在制定精确和个性化的储存方案时可能需要考虑这一点。除了指导正确的血液储存外,能量和氧化还原代谢途径之间这种紧密的遗传联系有朝一日可能在确定个体对代谢疾病的易感性方面证明是有用的。

相似文献

1
Multi-omics Evidence for Inheritance of Energy Pathways in Red Blood Cells.
Mol Cell Proteomics. 2016 Dec;15(12):3614-3623. doi: 10.1074/mcp.M116.062349. Epub 2016 Oct 24.
2
The heritability of metabolite concentrations in stored human red blood cells.
Transfusion. 2014 Aug;54(8):2055-63. doi: 10.1111/trf.12605. Epub 2014 Mar 6.
3
Heritability of glutathione and related metabolites in stored red blood cells.
Free Radic Biol Med. 2014 Nov;76:107-13. doi: 10.1016/j.freeradbiomed.2014.07.040. Epub 2014 Aug 7.
4
The heritability of hemolysis in stored human red blood cells.
Transfusion. 2015 Jun;55(6):1178-85. doi: 10.1111/trf.12992. Epub 2015 Feb 2.
5
Red blood cell storage in additive solution-7 preserves energy and redox metabolism: a metabolomics approach.
Transfusion. 2015 Dec;55(12):2955-66. doi: 10.1111/trf.13253. Epub 2015 Aug 14.
8
The concentration of glutathione in human erythrocytes is a heritable trait.
Free Radic Biol Med. 2013 Dec;65:742-749. doi: 10.1016/j.freeradbiomed.2013.08.002. Epub 2013 Aug 9.
9
Metabolomics evaluation of early-storage red blood cell rejuvenation at 4°C and 37°C.
Transfusion. 2018 Aug;58(8):1980-1991. doi: 10.1111/trf.14623. Epub 2018 Apr 24.
10
Stored RBC metabolism as a function of caffeine levels.
Transfusion. 2020 Jun;60(6):1197-1211. doi: 10.1111/trf.15813. Epub 2020 May 11.

引用本文的文献

1
RBC-GEM: A genome-scale metabolic model for systems biology of the human red blood cell.
PLoS Comput Biol. 2025 Mar 12;21(3):e1012109. doi: 10.1371/journal.pcbi.1012109. eCollection 2025 Mar.
5
Erythrocyte sphingolipid species as biomarkers of Alzheimer's disease.
J Pharm Anal. 2022 Feb;12(1):178-185. doi: 10.1016/j.jpha.2021.07.005. Epub 2021 Jul 14.
7
Argonaut: A Web Platform for Collaborative Multi-omic Data Visualization and Exploration.
Patterns (N Y). 2020 Oct 9;1(7). doi: 10.1016/j.patter.2020.100122.
9
Red blood cell storage lesion: causes and potential clinical consequences.
Blood Transfus. 2019 Jan;17(1):27-52. doi: 10.2450/2019.0217-18.
10
Redox Status, Procoagulant Activity, and Metabolome of Fresh Frozen Plasma in Glucose 6-Phosphate Dehydrogenase Deficiency.
Front Med (Lausanne). 2018 Feb 5;5:16. doi: 10.3389/fmed.2018.00016. eCollection 2018.

本文引用的文献

1
The Perseus computational platform for comprehensive analysis of (prote)omics data.
Nat Methods. 2016 Sep;13(9):731-40. doi: 10.1038/nmeth.3901. Epub 2016 Jun 27.
2
Proteomics Moves into the Fast Lane.
Cell Syst. 2016 Mar 23;2(3):142-3. doi: 10.1016/j.cels.2016.03.002.
3
One-hour proteome analysis in yeast.
Nat Protoc. 2015 May;10(5):701-14. doi: 10.1038/nprot.2015.040. Epub 2015 Apr 9.
4
The heritability of hemolysis in stored human red blood cells.
Transfusion. 2015 Jun;55(6):1178-85. doi: 10.1111/trf.12992. Epub 2015 Feb 2.
5
Alzheimer's disease: the amyloid hypothesis and the Inverse Warburg effect.
Front Physiol. 2015 Jan 14;5:522. doi: 10.3389/fphys.2014.00522. eCollection 2014.
6
Genetic diagnosis and prognosis of Alzheimer's disease: challenges and opportunities.
Expert Rev Mol Diagn. 2015 Mar;15(3):339-48. doi: 10.1586/14737159.2015.1002469. Epub 2015 Jan 29.
7
Red blood cell storage duration and trauma.
Transfus Med Rev. 2015 Apr;29(2):120-6. doi: 10.1016/j.tmrv.2014.09.007. Epub 2014 Dec 18.
8
Additive solution-7 reduces the red blood cell cold storage lesion.
Transfusion. 2015 Mar;55(3):491-8. doi: 10.1111/trf.12867. Epub 2014 Sep 19.
9
Inverse association between cancer and neurodegenerative disease: review of the epidemiologic and biological evidence.
Biogerontology. 2014 Dec;15(6):547-57. doi: 10.1007/s10522-014-9523-2. Epub 2014 Aug 12.
10
Heritability of glutathione and related metabolites in stored red blood cells.
Free Radic Biol Med. 2014 Nov;76:107-13. doi: 10.1016/j.freeradbiomed.2014.07.040. Epub 2014 Aug 7.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验