与 COVID-19 严重程度相关的蛋白质和代谢物生物标志物的遗传力:代谢组学和蛋白质组学分析。
Heritability of Protein and Metabolite Biomarkers Associated with COVID-19 Severity: A Metabolomics and Proteomics Analysis.
机构信息
Department of Pathology and Laboratory Medicine, University of Wisconsin-Madison, 3170 UW Medical Foundation Centennial Building (MFCB), Madison, WI 53705-2281, USA.
出版信息
Biomolecules. 2022 Dec 27;13(1):46. doi: 10.3390/biom13010046.
OBJECTIVES
Prior studies have characterized protein and metabolite changes associated with SARS-CoV-2 infection; we hypothesized that these biomarkers may be part of heritable metabolic pathways in erythrocytes.
METHODS
Using a twin study of erythrocyte protein and metabolite levels, we describe the heritability of, and correlations among, previously identified biomarkers that correlate with COVID-19 severity. We used gene ontology and pathway enrichment analysis tools to identify pathways and biological processes enriched among these biomarkers.
RESULTS
Many COVID-19 biomarkers are highly heritable in erythrocytes. Among heritable metabolites downregulated in COVID-19, metabolites involved in amino acid metabolism and biosynthesis are enriched. Specific amino acid metabolism pathways (valine, leucine, and isoleucine biosynthesis; glycine, serine, and threonine metabolism; and arginine biosynthesis) are heritable in erythrocytes.
CONCLUSIONS
Metabolic pathways downregulated in COVID-19, particularly amino acid biosynthesis and metabolism pathways, are heritable in erythrocytes. This finding suggests that a component of the variation in COVID-19 severity may be the result of phenotypic variation in heritable metabolic pathways; future studies will be necessary to determine whether individual variation in amino acid metabolism pathways correlates with heritable outcomes of COVID-19.
目的
先前的研究已经描述了与 SARS-CoV-2 感染相关的蛋白质和代谢物变化;我们假设这些生物标志物可能是红细胞中可遗传代谢途径的一部分。
方法
我们使用红细胞蛋白和代谢物水平的双胞胎研究,描述了与 COVID-19 严重程度相关的先前确定的生物标志物的遗传性及其相关性。我们使用基因本体论和途径富集分析工具来识别这些生物标志物中富集的途径和生物学过程。
结果
COVID-19 生物标志物在红细胞中具有高度遗传性。在 COVID-19 下调的可遗传代谢物中,涉及氨基酸代谢和生物合成的代谢物是丰富的。特定的氨基酸代谢途径(缬氨酸、亮氨酸和异亮氨酸生物合成;甘氨酸、丝氨酸和苏氨酸代谢;和精氨酸生物合成)在红细胞中是可遗传的。
结论
COVID-19 下调的代谢途径,特别是氨基酸生物合成和代谢途径,在红细胞中是可遗传的。这一发现表明,COVID-19 严重程度的变化部分可能是遗传性代谢途径表型变异的结果;未来的研究将需要确定氨基酸代谢途径的个体差异是否与 COVID-19 的遗传性结果相关。