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编码鳟鱼C-多糖结合蛋白的多个基因和转录变体在感染杀鲑气单胞菌后受到不同程度但强烈的诱导。

Multiple gene and transcript variants encoding trout C-polysaccharide binding proteins are differentially but strongly induced after infection with Aeromonas salmonicida.

作者信息

Köbis Judith M, Rebl Henrike, Goldammer Tom, Rebl Alexander

机构信息

Leibniz Institute for Farm Animal Biology (FBN), Institute for Genome Biology, Wilhelm-Stahl-Allee 2, 18196 Dummerstorf, Germany.

Rostock University Medical Center, Department of Cell Biology, Schillingallee 69, 18057 Rostock, Germany.

出版信息

Fish Shellfish Immunol. 2017 Jan;60:509-519. doi: 10.1016/j.fsi.2016.11.021. Epub 2016 Nov 9.

DOI:10.1016/j.fsi.2016.11.021
PMID:27836722
Abstract

Two 'trout C-polysaccharide-binding proteins,' TCBP1 and -2, with relevance to early inflammatory events have been discovered in the last century. The present study characterises the respective cDNA sequences from rainbow trout (Oncorhynchus mykiss), including multiple TCBP1 transcript variants. These variants are generated either by the use of alternative splice sites or the exclusion of exons. The longest mRNA isoform, TCBP1-1, encodes a 245-aa protein with a large signal peptide and a complement component C1q domain. The shortest mRNA isoform, TCBP1-5, contains a premature termination codon and hence fails to encode a functional factor. The 224-aa-long TCBP2 protein consists of a comparably shorter signal peptide and a pentraxin domain. Evolutionary analyses clearly separated TCBP1 and -2 because of distinctive protein motifs. Expression profiling in the liver, spleen, and head kidney tissues of healthy trout revealed that TCBP2 mRNA concentrations were higher than the concentrations of all five TCBP1 mRNA isoforms together. The hepatic levels of these TCBP1 variants increased significantly upon infection with Aeromonas salmonicida, whereas TCBP2 transcript levels rose moderately. As the biological function of TCBP1 is barely understood, we tagged this factor with the green fluorescent protein and visualised its expression in HEK-293 cells. Overexpression of TCBP1 increased the level of active NF-κB factors and induced cell death, indicating its involvement in proapoptotic NF-κB-dependent signalling routes.

摘要

上世纪发现了两种与早期炎症事件相关的“鳟鱼C-多糖结合蛋白”,即TCBP1和TCBP2。本研究对虹鳟(Oncorhynchus mykiss)的相应cDNA序列进行了表征,包括多个TCBP1转录变体。这些变体是通过使用可变剪接位点或外显子排除产生的。最长的mRNA异构体TCBP1-1编码一个含有大信号肽和补体成分C1q结构域的245个氨基酸的蛋白质。最短的mRNA异构体TCBP1-5含有一个提前终止密码子,因此无法编码功能性因子。224个氨基酸长的TCBP2蛋白由一个相对较短的信号肽和一个五聚素结构域组成。进化分析由于独特的蛋白质基序清楚地将TCBP1和TCBP2区分开来。对健康鳟鱼肝脏、脾脏和头肾组织的表达谱分析表明,TCBP2 mRNA浓度高于所有五种TCBP1 mRNA异构体浓度之和。感染杀鲑气单胞菌后,这些TCBP1变体的肝脏水平显著增加,而TCBP2转录水平适度上升。由于对TCBP1的生物学功能了解甚少,我们用绿色荧光蛋白标记了这个因子,并在HEK-293细胞中观察了它的表达。TCBP1的过表达增加了活性NF-κB因子的水平并诱导细胞死亡,表明它参与了促凋亡的NF-κB依赖性信号通路。

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