deCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland.
Department of Anthropology, University of Iceland, 101 Reykjavik, Iceland.
Nat Commun. 2016 Nov 16;7:13490. doi: 10.1038/ncomms13490.
Adult height is a highly heritable trait. Here we identified 31.6 million sequence variants by whole-genome sequencing of 8,453 Icelanders and tested them for association with adult height by imputing them into 88,835 Icelanders. Here we discovered 13 novel height associations by testing four different models including parent-of-origin (|β|=0.4-10.6 cm). The minor alleles of three parent-of-origin signals associate with less height only when inherited from the father and are located within imprinted regions (IGF2-H19 and DLK1-MEG3). We also examined the association of these sequence variants in a set of 12,645 Icelanders with birth length measurements. Two of the novel variants, (IGF2-H19 and TET1), show significant association with both adult height and birth length, indicating a role in early growth regulation. Among the parent-of-origin signals, we observed opposing parental effects raising questions about underlying mechanisms. These findings demonstrate that common variations affect human growth by parental imprinting.
成人身高是一个高度遗传的特征。在这里,我们通过对 8453 名冰岛人进行全基因组测序,鉴定出了 3160 万个序列变异,并通过将这些变异导入 88835 名冰岛人中,测试了它们与成人身高的关联。在这里,我们通过测试四种不同的模型(包括亲本来源(|β|=0.4-10.6cm))发现了 13 个新的身高关联。三个亲本来源信号的次要等位基因仅在从父亲那里继承时与身高较低相关,并且位于印迹区域(IGF2-H19 和 DLK1-MEG3)内。我们还在一组 12645 名冰岛人具有出生长度测量的情况下检查了这些序列变异的关联。两个新变体(IGF2-H19 和 TET1),与成人身高和出生长度都有显著关联,表明它们在早期生长调节中发挥作用。在亲本来源信号中,我们观察到相反的亲本效应,这引发了对潜在机制的质疑。这些发现表明,常见变异通过亲本印迹影响人类生长。