Wang Cheng, Flanagan Moira L, McGillicuddy Ryan D, Zheng Haibin, Ginzburg Alan Ruvim, Yang Xiaojing, Moffat Keith, Engel Gregory S
Department of Chemistry, The James Franck Institute, Institute for Biophysical Dyanmics, The University of Chicago, Chicago, Illinois.
Graduate Program in Biophysical Science, The James Franck Institute, Institute for Biophysical Dynamics, The University of Chicago, Chicago, Illinois.
Biophys J. 2016 Nov 15;111(10):2125-2134. doi: 10.1016/j.bpj.2016.10.017.
Phytochromes are red/far-red photoreceptors that are widely distributed in plants and prokaryotes. Ultrafast photoisomerization of a double bond in a biliverdin cofactor or other linear tetrapyrrole drives their photoactivity, but their photodynamics are only partially understood. Multiexponential dynamics were observed in previous ultrafast spectroscopic studies and were attributed to heterogeneous populations of the pigment-protein complex. In this work, two-dimensional photon echo spectroscopy was applied to study dynamics of the bacteriophytochromes RpBphP2 and PaBphP. Two-dimensional photon echo spectroscopy can simultaneously resolve inhomogeneity in ensembles and fast dynamics by correlating pump wavelength with the emitted signal wavelength. The distribution of absorption and emission energies within the same state indicates an ensemble of heterogeneous protein environments that are spectroscopically distinct. However, the lifetimes of the dynamics are uniform across the ensemble, suggesting a homogeneous model involving sequential intermediates for the initial photodynamics of isomerization.
光敏色素是广泛分布于植物和原核生物中的红/远红光感受器。藻胆素辅因子或其他线性四吡咯中双键的超快光异构化驱动其光活性,但其光动力学仅得到部分理解。在之前的超快光谱研究中观察到多指数动力学,并归因于色素-蛋白质复合物的异质群体。在这项工作中,二维光子回波光谱被用于研究细菌光敏色素RpBphP2和PaBphP的动力学。二维光子回波光谱可以通过将泵浦波长与发射信号波长相关联,同时分辨集合中的不均匀性和快速动力学。同一状态内吸收和发射能量的分布表明存在光谱上不同的异质蛋白质环境集合。然而,动力学的寿命在整个集合中是均匀的,这表明存在一个涉及异构化初始光动力学的连续中间体的均匀模型。