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压力加速蛋白水解:一种普遍机制。

Pressure acceleration of proteolysis: A general mechanism.

作者信息

Akasaka Kazuyuki, Nagahata Harumi, Maeno Akihiro, Sasaki Ken

机构信息

High Pressure Protein Research Center, Institute of Advanced Technology, Kinki University, 930 Nishimitani, Kinokawa 649-6493, Japan.

School of Biology-Oriented Science and Technology, Kinki University, 930 Nishimitani, Kinokawa 649-6493, Japan.

出版信息

Biophysics (Nagoya-shi). 2008 Dec 18;4:29-32. doi: 10.2142/biophysics.4.29. eCollection 2008.

DOI:10.2142/biophysics.4.29
PMID:27857573
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5036607/
Abstract

Remarkable acceleration of enzymatic proteolysis by pressure at kbar range is reported with ubiquitin as substrate and α-chymotrypsin as enzyme. The acceleration is interpreted in terms of the shift of conformational equilibrium in ubiquitin from the non-degradable folded conformer to the enzyme-degradable unfolded conformer by pressure because of the lower volume of the latter, while the enzymatic activity of α-chymotrypsin is still largely retained. This mechanism is considered generally applicable to most globular proteins and the method of pressure-accelerated proteolysis will have an enormous potential utility in systems wherever efficient removal of proteins is needed.

摘要

据报道,以泛素为底物、α-糜蛋白酶为酶时,在千巴范围内压力可显著加速酶促蛋白水解。这种加速被解释为,由于酶可降解的未折叠构象体体积较小,压力使泛素的构象平衡从不可降解的折叠构象体向酶可降解的未折叠构象体转变,而α-糜蛋白酶的酶活性仍能在很大程度上得以保留。该机制被认为普遍适用于大多数球状蛋白质,并且压力加速蛋白水解的方法在任何需要有效去除蛋白质的系统中都将具有巨大的潜在应用价值。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4225/5036607/3e8a3e04f55c/4_29f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4225/5036607/a22a7f4e1a99/4_29f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4225/5036607/f0b81d80e292/4_29f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4225/5036607/3e8a3e04f55c/4_29f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4225/5036607/a22a7f4e1a99/4_29f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4225/5036607/f0b81d80e292/4_29f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4225/5036607/3e8a3e04f55c/4_29f3.jpg

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本文引用的文献

1
Application of high hydrostatic pressure for increasing activity and stability of enzymes.高静水压在提高酶活性和稳定性方面的应用。
Biotechnol Bioeng. 1996 Oct 20;52(2):320-31. doi: 10.1002/(SICI)1097-0290(19961020)52:2<320::AID-BIT12>3.0.CO;2-N.
2
Application of pressurized solvents for ultrafast trypsin hydrolysis in proteomics: proteomics on the fly.加压溶剂在蛋白质组学中超快速胰蛋白酶水解中的应用:即时蛋白质组学
J Proteome Res. 2008 Aug;7(8):3276-81. doi: 10.1021/pr7008077. Epub 2008 Jul 8.
3
Basic folded and low-populated locally disordered conformers of SUMO-2 characterized by NMR spectroscopy at varying pressures.
通过接种羊瘙痒病感染的仓鼠朊病毒蛋白制备的“抗蛋白酶K”原纤维的压力辅助解离和降解
Prion. 2014;8(4):314-8. doi: 10.4161/pri.32081.
通过核磁共振光谱在不同压力下表征的SUMO-2的基本折叠和低丰度局部无序构象异构体。
Biochemistry. 2008 Jan 8;47(1):30-9. doi: 10.1021/bi7014458. Epub 2007 Dec 15.
4
Evolutionally conserved intermediates between ubiquitin and NEDD8.泛素与NEDD8之间的进化保守中间体。
J Mol Biol. 2006 Oct 20;363(2):395-404. doi: 10.1016/j.jmb.2006.07.074. Epub 2006 Aug 2.
5
Cold denaturation of ubiquitin at high pressure.泛素在高压下的冷变性
Magn Reson Chem. 2006 Jul;44 Spec No:S108-13. doi: 10.1002/mrc.1820.
6
Probing conformational fluctuation of proteins by pressure perturbation.通过压力扰动探究蛋白质的构象波动
Chem Rev. 2006 May;106(5):1814-35. doi: 10.1021/cr040440z.
7
NMR snapshots of a fluctuating protein structure: ubiquitin at 30 bar-3 kbar.波动蛋白结构的核磁共振快照:30巴至3千巴压力下的泛素
J Mol Biol. 2005 Mar 25;347(2):277-85. doi: 10.1016/j.jmb.2005.01.052.
8
High-pressure NMR spectroscopy for characterizing folding intermediates and denatured states of proteins.用于表征蛋白质折叠中间体和变性状态的高压核磁共振光谱学。
Methods. 2004 Sep;34(1):133-43. doi: 10.1016/j.ymeth.2004.03.010.
9
Close identity of a pressure-stabilized intermediate with a kinetic intermediate in protein folding.压力稳定中间体与蛋白质折叠动力学中间体的紧密一致性。
Proc Natl Acad Sci U S A. 2003 Mar 18;100(6):3167-72. doi: 10.1073/pnas.0630309100. Epub 2003 Mar 10.
10
The theory of pressure effects on enzymes.压力对酶的影响理论
Adv Protein Chem. 1981;34:93-166. doi: 10.1016/s0065-3233(08)60519-7.