Menon T
Department of Microbiology, Dr AL Mudaliar, Post Graduate Institute of Basic Medical Sciences, University of Madras, Chennai, Tamil Nadu, India.
Indian J Med Microbiol. 2016 Oct-Dec;34(4):421-426. doi: 10.4103/0255-0857.195371.
The viridans group streptococci are a heterogeneous group of organisms which exist as commensals in the oropharynx and the gut. They cause serious infections when they gain entry into sterile sites particularly in patients with predisposing conditions. Classification and species differentiation of these organisms has always been a challenge because of phenotypic differences between strains of the same species. Facklam's typing scheme based on six metabolic properties has been the most widely used and many commercial identification systems are based on it. Due to the ambiguity in species differentiation based on phenotypic tests, nucleic acid-based methods have been developed to improve the identification of these organisms. Results using genotypic methods such as 16S rRNA and sodA gene sequencing have been promising. Multilocus sequence analysis of seven house-keeping genes map, pfl, pyk, ppaC, rpoB, soda and tuf amplified by polymerase chain reaction was found to be an accurate alternative to other methods and could be useful in the characterisation of larger collections of isolates.
草绿色链球菌是一组异质性微生物,作为共生菌存在于口咽和肠道中。当它们进入无菌部位时会引发严重感染,尤其是在有易感因素的患者中。由于同一菌种不同菌株之间存在表型差异,对这些微生物进行分类和菌种鉴别一直是一项挑战。基于六种代谢特性的法克兰分型方案是应用最广泛的,许多商业鉴定系统都基于此。由于基于表型试验的菌种鉴别存在模糊性,因此已开发出基于核酸的方法来改进对这些微生物的鉴定。使用16S rRNA和sodA基因测序等基因分型方法的结果很有前景。通过聚合酶链反应扩增的七个管家基因map、pfl、pyk、ppaC、rpoB、soda和tuf的多位点序列分析被发现是其他方法的准确替代方法,可用于对大量分离株进行特征分析。