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来自肠炎沙门氏菌的杂乱sumA错义抑制子具有有趣的作用机制。

The Promiscuous sumA Missense Suppressor from Salmonella enterica Has an Intriguing Mechanism of Action.

作者信息

Cole Ashley E, Hani Fatmah M, Altman Ronni, Meservy Megan, Roth John R, Altman Elliot

机构信息

Department of Biology, Middle Tennessee State University, Murfreesboro, Tennessee 37132.

Department of Microbiology and Molecular Genetics, University of California, Davis, California 95616.

出版信息

Genetics. 2017 Feb;205(2):577-588. doi: 10.1534/genetics.116.196550. Epub 2016 Dec 14.

Abstract

While most missense suppressors have very narrow specificities and only suppress the allele against which they were isolated, the sumA missense suppressor from Salmonella enterica serovar Typhimurium is a promiscuous or broad-acting missense suppressor that suppresses numerous missense mutants. The sumA missense suppressor was identified as a glyV tRNA Gly3(GAU/C) missense suppressor that can recognize GAU or GAC aspartic acid codons and insert a glycine amino acid instead of aspartic acid. In addition to rescuing missense mutants caused by glycine to aspartic acid changes as expected, sumA could also rescue a number of other missense mutants as well by changing a neighboring (contacting) aspartic acid to glycine, which compensated for the other amino acid change. Thus the ability of sumA to rescue numerous missense mutants was due in part to the large number of glycine codons in genes that can be mutated to an aspartic acid codon and in part to the general tolerability and/or preference for glycine amino acids in proteins. Because the glyV tRNA Gly3(GAU/C) missense suppressor has also been extensively characterized in Escherichia coli as the mutA mutator, we demonstrated that all gain-of-function mutants isolated in a glyV tRNA Gly3(GAU/C) missense suppressor are transferable to a wild-type background and thus the increased mutation rates, which occur in glyV tRNA Gly3(GAU/C) missense suppressors, are not due to the suppression of these mutants.

摘要

虽然大多数错义抑制子具有非常狭窄的特异性,仅抑制其分离所针对的等位基因,但来自鼠伤寒沙门氏菌血清型鼠伤寒的sumA错义抑制子是一种混杂或广泛作用的错义抑制子,可抑制众多错义突变体。sumA错义抑制子被鉴定为一种glyV tRNA Gly3(GAU/C)错义抑制子,它可以识别GAU或GAC天冬氨酸密码子,并插入甘氨酸氨基酸而非天冬氨酸。除了如预期那样拯救由甘氨酸变为天冬氨酸的错义突变体外,sumA还可以通过将相邻(接触)的天冬氨酸变为甘氨酸来拯救许多其他错义突变体,这补偿了其他氨基酸变化。因此,sumA拯救众多错义突变体的能力部分归因于基因中大量可突变为天冬氨酸密码子的甘氨酸密码子,部分归因于蛋白质中对甘氨酸氨基酸的一般耐受性和/或偏好。由于glyV tRNA Gly3(GAU/C)错义抑制子在大肠杆菌中也作为mutA诱变剂得到了广泛表征,我们证明在glyV tRNA Gly3(GAU/C)错义抑制子中分离到的所有功能获得性突变体都可转移到野生型背景中,因此在glyV tRNA Gly3(GAU/C)错义抑制子中出现的突变率增加并非由于这些突变体的抑制作用。

相似文献

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Suppressors of a UGG missense mutation in Escherichia coli.大肠杆菌中UGG错义突变的抑制因子。
J Bacteriol. 1980 Jul;143(1):285-92. doi: 10.1128/jb.143.1.285-292.1980.

本文引用的文献

1
Propensity of amino acids in loop regions connecting beta-strands.
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Suppressor gene alteration of protein primary structure.蛋白质一级结构的抑制基因改变。
Proc Natl Acad Sci U S A. 1963 Jul;50(1):9-16. doi: 10.1073/pnas.50.1.9.

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