Tozaki Teruaki, Kikuchi Mio, Kakoi Hironaga, Hirota Kei-Ichi, Mukai Kazutaka, Aida Hiroko, Nakamura Seiji, Nagata Shun-Ichi
Genetic Analysis Department, Laboratory of Racing Chemistry, Tochigi 320-0851, Japan.
Equine Research Institute, Japan Racing Association, Tochigi 329-0412, Japan.
J Equine Sci. 2016;27(4):157-164. doi: 10.1294/jes.27.157. Epub 2016 Dec 15.
Transcriptome analyses based on DNA microarray technology have been used to investigate gene expression profiles in horses. In this study, we aimed to identify exercise-induced changes in the expression profiles of genes in the peripheral blood of Thoroughbred horses using DNA microarray technology (15,429 genes on 43,603 probes). Blood samples from the jugular vein were collected from six horses before and 1 min, 4 hr, and 24 hr after all-out running on a treadmill. After the normalization of microarray data, a total of 26,830 probes were clustered into four groups and 11 subgroups showing similar expression changes based on k-mean clustering. The expression level of inflammation-related genes, including interleukin-1 receptor type II (IL-1R2), matrix metallopeptidase 8 (MMP8), protein S100-A8 (S100-A8), and serum amyloid A (SAA), increased at 4 hr after exercise, whereas that of c-Fos (FOS) increased at 1 min after exercise. These results indicated that the inflammatory response increased in the peripheral blood cells after exercise. Our study also revealed the presence of genes that may not be affected by all-out exercise. In conclusion, transcriptome analysis of peripheral blood cells could be used to monitor physiological changes induced by various external stress factors, including exercise, in Thoroughbred racehorses.
基于DNA微阵列技术的转录组分析已被用于研究马的基因表达谱。在本研究中,我们旨在利用DNA微阵列技术(43,603个探针上的15,429个基因)鉴定纯种马外周血中基因表达谱的运动诱导变化。在跑步机上全力奔跑前以及奔跑后1分钟、4小时和24小时,从6匹马的颈静脉采集血样。对微阵列数据进行标准化后,基于k均值聚类,共26,830个探针被聚类为四组和11个亚组,显示出相似的表达变化。包括白细胞介素-1受体II型(IL-1R2)、基质金属肽酶8(MMP8)、蛋白S100-A8(S100-A8)和血清淀粉样蛋白A(SAA)在内的炎症相关基因的表达水平在运动后4小时升高,而c-Fos(FOS)的表达水平在运动后1分钟升高。这些结果表明运动后外周血细胞中的炎症反应增强。我们的研究还揭示了可能不受全力运动影响的基因的存在。总之,外周血细胞的转录组分析可用于监测纯种赛马中包括运动在内的各种外部应激因素诱导的生理变化。