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编码胶原蛋白和基质金属蛋白酶系统的基因突变增加了主动脉夹层的风险。

Variants of genes encoding collagens and matrix metalloproteinase system increased the risk of aortic dissection.

机构信息

Division of Cardiology, Departments of Internal Medicine and Genetic Diagnosis Center, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, 430030, China.

Department of Cardiology, the First Affiliated Hospital, Nanjing Medical University, Nanjing, 210029, China.

出版信息

Sci China Life Sci. 2017 Jan;60(1):57-65. doi: 10.1007/s11427-016-0333-3. Epub 2016 Dec 13.

Abstract

Aortic dissection (AD) is a devastating, heterogeneous condition of aorta. The homeostasis between collagens and matrix metalloproteases (MMPs)/tissue inhibitors of MMPs (TIMPs) system in the extracellular matrix plays an important role for structure and functions of aorta. However, our knowledge on association between variants of genes in this system and pathogenesis of AD is very limited. We analyzed all yet known coding human genes of collagens (45 genes), MMPs/TIMPs (27 genes) in 702 sporadic AD patients and in 163 matched healthy controls, by using massively targeted next-generation and Sanger sequencing. To define the pathogenesis of potential disease-causing candidate genes, we performed transcriptome sequencing and pedigree co-segregation analysis in some genes and generated Col5a2 knockout rats. We identified 257 pathogenic or likely pathogenic variants which involved 88.89% (64/72) genes in collagens-MMPs/TIMPs system and accounted for 31.05% (218/702) sporadic AD patients. In them, 84.86% patients (185/218) carried one variant, 12.84% two variants and 2.30% more than two variants. Importantly, we identified 52 novel probably pathogenic loss-of-function (LOF) variants (20 nonsense, 16 frameshift, 14 splice sites, one stop-loss, one initiation codon) in 11.06% (50/452) AD patients, which were absent in 163 controls (P=2.5×10). Transcriptome sequencing revealed that identified variants induced dyshomeostasis in expression of collagens-TIMPs/MMPs systems. The Col5a2 rats manifested growth retardation and aortic dysplasia. Our study provides a first comprehensive map of genetic alterations in collagens-MMPs/TIMPs system in sporadic AD patients and suggests that variants of these genes contribute largely to AD pathogenesis.

摘要

主动脉夹层(AD)是一种破坏性的、异质性的主动脉疾病。细胞外基质中胶原和基质金属蛋白酶(MMPs)/MMPs 组织抑制剂(TIMPs)系统之间的平衡对于主动脉的结构和功能起着重要作用。然而,我们对该系统中基因变异与 AD 发病机制之间的关联的了解非常有限。我们使用大规模靶向下一代和 Sanger 测序技术,在 702 例散发性 AD 患者和 163 例匹配的健康对照中分析了胶原(45 个基因)、MMPs/TIMPs(27 个基因)中所有已知的编码人类基因。为了确定潜在致病候选基因的发病机制,我们在一些基因中进行了转录组测序和家系共分离分析,并生成了 Col5a2 基因敲除大鼠。我们鉴定了 257 个致病性或可能致病性的变异,这些变异涉及胶原-MMPs/TIMPs 系统中的 88.89%(64/72)的基因,占散发性 AD 患者的 31.05%(218/702)。其中,84.86%的患者(185/218)携带一个变异,12.84%的患者携带两个变异,2.30%的患者携带两个以上变异。重要的是,我们在 11.06%(50/452)的 AD 患者中鉴定了 52 个新的可能致病性无功能(LOF)变异(20 个无义,16 个移码,14 个剪接位点,1 个终止密码子缺失,1 个起始密码子),而这些变异在 163 例对照中不存在(P=2.5×10)。转录组测序显示,鉴定的变异导致胶原-TIMPs/MMPs 系统表达失衡。Col5a2 基因敲除大鼠表现出生长迟缓及主动脉发育不良。我们的研究提供了散发性 AD 患者中胶原-MMPs/TIMPs 系统遗传改变的第一张综合图谱,并表明这些基因的变异在很大程度上导致了 AD 的发病机制。

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