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新型2-(4-(4-取代哌嗪-1-基)亚苄基)肼基甲酰胺的设计、合成、计算机模拟及生物学评价

Design, synthesis, in silico and biological evaluation of novel 2-(4-(4-substituted piperazin-1-yl)benzylidene)hydrazine carboxamides.

作者信息

Kumari Shikha, Mishra Chandra Bhushan, Idrees Danish, Prakash Amresh, Yadav Rajesh, Hassan Md Imtaiyaz, Tiwari Manisha

机构信息

Bio-Organic Chemistry Laboratory, Dr. B.R. Ambedkar Centre for Biomedical Research, University of Delhi, North Campus, New Delhi, Delhi, 110007, India.

Centre for Interdisciplinary Research in Basic Sciences, Jamia Millia Islamia, Jamia Nagar, New Delhi, 110025, India.

出版信息

Mol Divers. 2017 Feb;21(1):163-174. doi: 10.1007/s11030-016-9714-7. Epub 2016 Dec 30.

Abstract

A series of novel 2-(4-(4-substituted piperazin-1-yl)benzylidene)hydrazinecarboxamide derivatives has been successfully designed and synthesized to evaluate their potential as carbonic anhydrase (CA) inhibitors. The inhibitory potential of synthesized compounds against human CAI and CAII was evaluated. Compounds 3a-n exhibited [Formula: see text] values between [Formula: see text] against CAI and [Formula: see text] against CAII. Compound 3g was the most active inhibitor, with an [Formula: see text] value of [Formula: see text] against CAII. Molecular docking studies of compound 3g with CAII showed this compound fits nicely in the active site of CAII and it interacts with the zinc ion ([Formula: see text]) along with three histidine residues in the active site. Molecular dynamics simulation studies of compound 3g complexed with CAII also showed essential interactions which were maintained up to 40 ns of simulation. In vivo sub-acute toxicity study using 3g (300 mg/kg) was found non-toxic in adult Wistar rats.

摘要

已成功设计并合成了一系列新型的2-(4-(4-取代哌嗪-1-基)亚苄基)肼甲酰胺衍生物,以评估它们作为碳酸酐酶(CA)抑制剂的潜力。评估了合成化合物对人CAI和CAII的抑制潜力。化合物3a-n对CAI的抑制常数(Ki)值在[具体数值区间1]之间,对CAII的抑制常数(Ki)值在[具体数值区间2]之间。化合物3g是最具活性的抑制剂,对CAII的抑制常数(Ki)值为[具体数值]。化合物3g与CAII的分子对接研究表明,该化合物能很好地契合CAII的活性位点,并与活性位点中的锌离子([具体离子表示])以及三个组氨酸残基相互作用。化合物3g与CAII复合的分子动力学模拟研究也显示了在长达40纳秒的模拟过程中维持的关键相互作用。使用3g(300毫克/千克)进行的体内亚急性毒性研究发现,其对成年Wistar大鼠无毒。

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