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非手性α,γ-杂合肽折叠体的结构二态性:12-螺旋与15/17-螺旋的共存

Structural Dimorphism of Achiral α,γ-Hybrid Peptide Foldamers: Coexistence of 12- and 15/17-Helices.

作者信息

Misra Rajkumar, Saseendran Abhijith, George Gijo, Veeresh Kuruva, Raja K Muruga Poopathi, Raghothama Srinivasarao, Hofmann Hans-Jörg, Gopi Hosahudya N

机构信息

Department of Chemistry, Indian Institution of Science Education and Research, Dr. Homi Bhabha Road, Pune, 411021, India.

NMR Research Center, Indian Institute of Science, Bangalore, 560012, India.

出版信息

Chemistry. 2017 Mar 13;23(15):3764-3772. doi: 10.1002/chem.201605753. Epub 2017 Feb 14.

Abstract

Here, novel 12-helices in α,γ-hybrid peptides composed of achiral α-aminoisobutyric acid (Aib) and 4-aminoisocaproic acid (Aic, doubly homologated Aib) monomers in 1:1 alternation are reported. The 12-helices were indicated by solution and crystal structural analyses of tetra- and heptapeptides. Surprisingly, single crystals of the longer nonapeptide displayed two different helix types: the novel 12-helix and an unprecedented 15/17-helix. Quantum chemical calculations on both helix types in a series of continuously lengthened Aib/Aic-hybrid peptides confirm that the 12-helix is more stable than the 15/17-helix in shorter peptides, whereas the 15/17-helix is more stable in longer sequences. Thus, the coexistence of both helix types can be expected within a definite range of sequence lengths. The novel 15/17- and 12-helices in α,γ-hybrid peptides with 5→1 and 4→1 hydrogen-bonding patterns, respectively, can be viewed as backbone-expanded analogues of native α- and 3 -helices.

摘要

本文报道了由非手性α-氨基异丁酸(Aib)和4-氨基己酸(Aic,Aib的双同系物)单体以1:1交替组成的α,γ-杂合肽中的新型12螺旋。通过对四肽和七肽的溶液和晶体结构分析表明了12螺旋的存在。令人惊讶的是,较长的九肽单晶显示出两种不同的螺旋类型:新型12螺旋和前所未有的15/17螺旋。对一系列连续延长的Aib/Aic杂合肽中两种螺旋类型的量子化学计算证实,在较短的肽中12螺旋比15/17螺旋更稳定,而在较长的序列中15/17螺旋更稳定。因此,在一定的序列长度范围内可以预期两种螺旋类型共存。α,γ-杂合肽中分别具有5→1和4→1氢键模式的新型15/17螺旋和12螺旋可被视为天然α螺旋和3螺旋的主链扩展类似物。

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