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血浆中循环游离DNA的LINE-1低甲基化状态作为结直肠癌的生物标志物

LINE-1 hypomethylation status of circulating cell-free DNA in plasma as a biomarker for colorectal cancer.

作者信息

Nagai Yuzo, Sunami Eiji, Yamamoto Yoko, Hata Keisuke, Okada Satoshi, Murono Koji, Yasuda Koji, Otani Kensuke, Nishikawa Takeshi, Tanaka Toshiaki, Kiyomatsu Tomomichi, Kawai Kazushige, Nozawa Hiroaki, Ishihara Soichiro, Hoon Dave S B, Watanabe Toshiaki

机构信息

Department of Surgical Oncology, Faculty of Medicine, The University of Tokyo, Bunkyo-ku, Tokyo, Japan.

Department of Translational Molecular Medicine, Div. Molecular Oncology, John Wayne Cancer Institute, Saint John's Hospital and Health Center, Santa Monica, CA, USA.

出版信息

Oncotarget. 2017 Feb 14;8(7):11906-11916. doi: 10.18632/oncotarget.14439.

DOI:10.18632/oncotarget.14439
PMID:28060757
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5355314/
Abstract

Colorectal cancer (CRC) is a serious public health problem and non-invasive biomarkers improving diagnosis or therapy are strongly required. Circulating cell-free DNA (cfDNA) has been a promising target for this purpose. In this study, we evaluated the potential of long interspersed nuclear element-1 (LINE-1) hypomethylation as a blood biomarker for CRC. LINE-1 hypomethylation level in plasma cfDNA in 114 CRC patients was retrospectively examined by absolute quantitative analysis of methylated alleles real-time PCR, and was expressed using LINE-1 hypomethylation index (LHI) [unmethylated copy number/ (methylated copy number + unmethylated copy number)]. Greater LHI values indicated enhanced hypomethylation. In our clinicopathological analysis, CRC patients with large tumors (≥6.0 cm), advanced N stage (≥2), and distant metastasis (M1) had statistically significantly higher cfDNA LHI than other CRC patients, suggesting cfDNA LHI as a disease progression biomarker for CRC. Furthermore, early stage I/II (n = 57) as well as advanced stage III/IV (n =57) CRC patients had significantly higher cfDNA LHI than healthy donors (n=53) [stage I/II: median 0.369 (95% confidence interval, 0.360-0.380) vs. 0.332 (0.325-0.339), P < 0.0001; stage III/IV: 0.372 (0.365-0.388) vs. 0.332 (0.325-0.339), P < 0.0001]. The receiver operating characteristic analysis showed that cfDNA LHI had the detection capacity of CRC with area under the curve(AUC) of 0.79 and 0.83 in stage I/II and stage III/IV CRC patients, respectively. The present study demonstrated for the first time the potential of plasma cfDNA LHI as a novel biomarker for CRC, particularly for early stage detection.

摘要

结直肠癌(CRC)是一个严重的公共卫生问题,因此迫切需要能够改善诊断或治疗的非侵入性生物标志物。循环游离DNA(cfDNA)一直是实现这一目标的一个有前景的靶点。在本研究中,我们评估了长散在核元件1(LINE-1)低甲基化作为CRC血液生物标志物的潜力。通过甲基化等位基因实时PCR的绝对定量分析,回顾性检测了114例CRC患者血浆cfDNA中的LINE-1低甲基化水平,并使用LINE-1低甲基化指数(LHI)[未甲基化拷贝数/(甲基化拷贝数+未甲基化拷贝数)]来表示。LHI值越高表明低甲基化程度越高。在我们的临床病理分析中,肿瘤较大(≥6.0 cm)、N分期较晚(≥2)和远处转移(M1)的CRC患者的cfDNA LHI在统计学上显著高于其他CRC患者,这表明cfDNA LHI可作为CRC疾病进展的生物标志物。此外,早期I/II期(n = 57)以及晚期III/IV期(n = 57)的CRC患者的cfDNA LHI显著高于健康供者(n = 53)[I/II期:中位数0.369(95%置信区间,0.360 - 0.380)对0.332(0.325 - 0.339),P < 0.0001;III/IV期:0.372(0.365 - 0.388)对0.332(0.325 - 0.339),P < 0.0001]。受试者工作特征分析表明,cfDNA LHI在I/II期和III/IV期CRC患者中对CRC的检测能力分别为曲线下面积(AUC)0.79和0.83。本研究首次证明了血浆cfDNA LHI作为CRC新型生物标志物的潜力,特别是在早期检测方面。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9565/5355314/2d301b1f02fb/oncotarget-08-11906-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9565/5355314/e62085b3a45a/oncotarget-08-11906-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9565/5355314/50cfc6c5ee4b/oncotarget-08-11906-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9565/5355314/2d301b1f02fb/oncotarget-08-11906-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9565/5355314/e62085b3a45a/oncotarget-08-11906-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9565/5355314/50cfc6c5ee4b/oncotarget-08-11906-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9565/5355314/2d301b1f02fb/oncotarget-08-11906-g003.jpg

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