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线性肽的结构与构象。十二、色氨酰-甘氨酰-甘氨酸二水合物的结构

Structure and conformation of linear peptides. XII. Structure of tryptophanyl-glycyl-glycine dihydrate.

作者信息

Subramanian E, Sahayamary J J

机构信息

Department of Crystallography and Biophysics, University of Madras, India.

出版信息

Int J Pept Protein Res. 1989 Aug;34(2):134-8. doi: 10.1111/j.1399-3011.1989.tb01502.x.

Abstract

The crystal structure of a tripeptide, tryptophanyl-glycyl-glycine dihydrate (C15H18N4O4.2H2O, molecular weight = 354) has been determined. The crystals are orthorhombic, space group P2(1)2(1)2(1), with a = 7.875 (1) A, b = 9.009(1), c = 24.307(1) and Z = 4. The final R-index is 0.058 for 1488 reflections [sin theta)/lambda less than or equal to 0.6 A-1) with I greater than 2 sigma (I). The molecule exists as a zwitterion, with terminal NH3+ and COO- groups. The peptide units are trans and nearly perpendicular to the plane of the carboxyl group. The backbone torsion angles are: psi 1 = 132.7 degrees, omega 1 = 174.2 degrees, phi 2 = 88.2 degrees, psi 2 = 8.6 degrees, omega 2 = -179.8 degrees, phi 3 = -85.2 degrees, psi 31 = -178.1 degrees, psi 32 = 5.0 degrees. For the sidechain of tryptophan, chi 1 = -171.6 degrees, chi 2 = 101.0 degrees.

摘要

已确定三肽色氨酰 - 甘氨酰 - 甘氨酸二水合物(C15H18N4O4·2H2O,分子量 = 354)的晶体结构。晶体为正交晶系,空间群P2(1)2(1)2(1),a = 7.875 (1) Å,b = 9.009(1),c = 24.307(1),Z = 4。对于1488个[sinθ/λ≤0.6 Å-1且I>2σ(I)]反射,最终R指数为0.058。该分子以两性离子形式存在,带有末端NH3+和COO-基团。肽单元为反式且几乎垂直于羧基平面。主链扭转角为:ψ1 = 132.7°,ω1 = 174.2°,φ2 = 88.2°,ψ2 = 8.6°,ω2 = -179.8°,φ3 = -85.2°,ψ31 = -178.1°,ψ32 = 5.0°。对于色氨酸侧链,χ1 = -171.6°,χ2 = 101.0°。

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