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[电烧伤或热烧伤患者血清中微小RNA表达谱分析]

[Analysis of microRNA expression profile in serum of patients with electrical burn or thermal burn].

作者信息

Ruan Q F, Jiang M J, Ye Z Q, Zhao C L, Xie W G

机构信息

Institute of Burns, Tongren Hospital of Wuhan University & Wuhan Third Hospital, Wuhan 430060, China.

出版信息

Zhonghua Shao Shang Za Zhi. 2017 Jan 20;33(1):37-42. doi: 10.3760/cma.j.issn.1009-2587.2017.01.009.

DOI:10.3760/cma.j.issn.1009-2587.2017.01.009
PMID:28103994
Abstract

To explore the differential expression of microRNAs in the serum among patients with electrical burn or thermal burn and healthy persons and to explore the significance. In this study we included three patients with electrical burn and three patients with thermal burn, conforming to the inclusion criteria and hospitalized in our burn ward from June to August 2015, and three healthy adult volunteers. Their serum samples were separated from whole blood and divided into electrical burn group, thermal burn group, and normal control group. Total RNA was extracted from their serum samples using Trizol method. The differentially expressed microRNAs (with differential ratio larger than or equal to 2.000, less than or equal to 0.500) among the three groups were screened by microRNA chip technique. Then cluster and Venn diagram analysis of the differentially expressed microRNAs were performed. Enrichment analysis of Kyoto encyclopedia of genes and genomes (KEGG) signaling pathway was performed on the distinctly changed microRNAs (with differential ratio larger than or equal to 5.000, less than or equal to 0.500). There were 220 differentially expressed microRNAs among serum of the three groups. MicroRNA expression profiles in serum of electrical burn and thermal burn groups were different from that in serum of normal control group. Compared with those in serum of normal control group, the expressions of 59 microRNAs changed more than 2.000 times in serum of electrical burn group, with 50 up-regulated microRNAs and 9 down-regulated microRNAs; the expressions of 40 microRNAs changed more than 2.000 times in serum of thermal burn group, with 21 up-regulated microRNAs and 19 down-regulated microRNAs. Compared with those in serum of thermal burn group, the expressions of 167 microRNAs changed more than 2.000 times in serum of electrical burn group. There were 17 exclusively expressed microRNAs in serum of thermal burn group and 26 exclusively expressed microRNAs in serum of electrical burn group, compared with those in serum of normal control group. Enrichment analysis of KEGG signaling pathway showed that compared with those in serum of normal control group, microRNAs which changed distinctly in serum of electrical burn group took part in the insulin secretion signaling pathway, arrhythmogenic right ventricular cardiomyopathy signaling pathway, hypertrophic cardiomyopathy signaling pathway, glutamatergic synapse signaling pathway, calcium signaling pathway, cyclic adenosine monophosphate signaling pathway, glycerophospholipid metabolism, pyrimidine metabolism, serotonergic synapse signaling pathway, etc, while microRNAs which changed distinctly in serum of thermal burn group took part in the tumor transcription misregulation signaling pathway, proteoglycans in tumor signaling pathway, microRNAs in tumor signaling pathway, long-term potentiation signaling pathway, citrate cycle signaling pathway, tumor necrosis factor signaling pathway, focal adhesion signaling pathway, endocytosis signaling pathway, insulin secretion signaling pathway, p53 signaling pathway, and estrogen signaling pathway, etc. MicroRNA expression profiles in serum of electrical and thermal burn are different from that in serum of healthy adult. The signaling pathways enriched with target genes which are regulated by the differentially expressed microRNAs are related to the pathological changes and clinical manifestations after electrical or thermal burn.

摘要

探讨电烧伤或热烧伤患者与健康人血清中微小RNA的差异表达及其意义。本研究纳入2015年6月至8月符合纳入标准并在我院烧伤病房住院的3例电烧伤患者、3例热烧伤患者及3名健康成年志愿者。采集其全血并分离血清,分为电烧伤组、热烧伤组和正常对照组。采用Trizol法从血清样本中提取总RNA。通过微小RNA芯片技术筛选三组中差异表达的微小RNA(差异倍数大于或等于2.000,小于或等于0.500)。然后对差异表达的微小RNA进行聚类和韦恩图分析。对差异明显的微小RNA(差异倍数大于或等于5.000,小于或等于0.500)进行京都基因与基因组百科全书(KEGG)信号通路富集分析。三组血清中共有220个差异表达的微小RNA。电烧伤组和热烧伤组血清中的微小RNA表达谱与正常对照组不同。与正常对照组血清相比,电烧伤组血清中有59个微小RNA的表达变化超过2.000倍,其中50个上调,9个下调;热烧伤组血清中有40个微小RNA的表达变化超过2.000倍,其中21个上调,19个下调。与热烧伤组血清相比,电烧伤组血清中有167个微小RNA的表达变化超过2.000倍。与正常对照组血清相比,热烧伤组血清中有17个特异性表达的微小RNA,电烧伤组血清中有26个特异性表达的微小RNA。KEGG信号通路富集分析显示,与正常对照组血清相比,电烧伤组血清中差异明显的微小RNA参与胰岛素分泌信号通路、致心律失常性右室心肌病信号通路、肥厚型心肌病信号通路、谷氨酸能突触信号通路、钙信号通路、环磷酸腺苷信号通路、甘油磷脂代谢、嘧啶代谢、5-羟色胺能突触信号通路等;热烧伤组血清中差异明显的微小RNA参与肿瘤转录失调信号通路、肿瘤中的蛋白聚糖信号通路、肿瘤中的微小RNA信号通路、长时程增强信号通路、柠檬酸循环信号通路、肿瘤坏死因子信号通路、粘着斑信号通路、内吞作用信号通路、胰岛素分泌信号通路、p53信号通路和雌激素信号通路等。电烧伤和热烧伤患者血清中的微小RNA表达谱与健康成年人不同。差异表达的微小RNA调控的靶基因富集的信号通路与电烧伤或热烧伤后的病理变化和临床表现相关。

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